Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hbb-b1P02088 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hbb-b1P02088 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Hbb-b1P02088 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Hbb-b1P02088 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hbb-b1P02088 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.01□□□□□ -0.17
Hbb-b1P02088 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hbb-b1P02088 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hbb-b1P02088 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14□□□□□ -0.17
Hbb-b1P02088 Tdp2-203ENSMUST00000223804 1136 ntBASIC14□□□□□ -0.17
Hbb-b1P02088 Gm35558-201ENSMUST00000222675 2219 ntBASIC14□□□□□ -0.17
Hbb-b1P02088 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hbb-b1P02088 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Hbb-b1P02088 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Hbb-b1P02088 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hbb-b1P02088 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.99□□□□□ -0.17
Hbb-b1P02088 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hbb-b1P02088 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.98□□□□□ -0.17
Hbb-b1P02088 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hbb-b1P02088 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.97□□□□□ -0.17
Hbb-b1P02088 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hbb-b1P02088 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hbb-b1P02088 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.96□□□□□ -0.17
Hbb-b1P02088 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms