Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DUX4L16-201ENST00000555130 1264 ntBASIC10.1□□□□□ -0.79
USH2AO75445 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
USH2AO75445 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
USH2AO75445 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC10.09□□□□□ -0.79
USH2AO75445 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 AL445228.2-201ENST00000605589 952 ntBASIC10.09□□□□□ -0.79
USH2AO75445 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
USH2AO75445 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
USH2AO75445 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
USH2AO75445 AC105036.2-201ENST00000569468 176 ntBASIC10.09□□□□□ -0.79
USH2AO75445 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
USH2AO75445 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC10.09□□□□□ -0.79
USH2AO75445 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 CNN2P6-201ENST00000439038 900 ntBASIC10.09□□□□□ -0.79
USH2AO75445 RGMA-211ENST00000557420 989 ntTSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 AC006058.3-201ENST00000606217 1069 ntBASIC10.09□□□□□ -0.79
USH2AO75445 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 PEX7-202ENST00000367756 680 ntTSL 3 BASIC10.09□□□□□ -0.79
USH2AO75445 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
USH2AO75445 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 UBE2DNL-204ENST00000602536 740 ntBASIC10.08□□□□□ -0.8
USH2AO75445 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC10.08□□□□□ -0.8
USH2AO75445 SHF-208ENST00000560734 1731 ntTSL 3 BASIC10.08□□□□□ -0.8
USH2AO75445 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
USH2AO75445 AC008550.1-201ENST00000511500 884 ntBASIC10.08□□□□□ -0.8
USH2AO75445 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC10.08□□□□□ -0.8
USH2AO75445 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
USH2AO75445 AC133637.1-201ENST00000624115 1537 ntBASIC10.08□□□□□ -0.8
USH2AO75445 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC10.08□□□□□ -0.8
USH2AO75445 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC10.08□□□□□ -0.8
USH2AO75445 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC10.08□□□□□ -0.8
USH2AO75445 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC10.08□□□□□ -0.8
USH2AO75445 DUX4L4-201ENST00000566884 1269 ntBASIC10.08□□□□□ -0.8
USH2AO75445 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
USH2AO75445 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC10.07□□□□□ -0.8
USH2AO75445 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC10.07□□□□□ -0.8
USH2AO75445 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC10.07□□□□□ -0.8
USH2AO75445 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
USH2AO75445 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC10.07□□□□□ -0.8
USH2AO75445 RPS2P4-201ENST00000476944 856 ntBASIC10.07□□□□□ -0.8
USH2AO75445 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
USH2AO75445 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
USH2AO75445 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 UNC93B4-201ENST00000505679 747 ntBASIC10.07□□□□□ -0.8
USH2AO75445 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 AC073648.6-201ENST00000641589 218 ntBASIC10.07□□□□□ -0.8
USH2AO75445 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
USH2AO75445 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
USH2AO75445 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.07□□□□□ -0.8
USH2AO75445 AC007322.1-201ENST00000426983 750 ntBASIC10.07□□□□□ -0.8
USH2AO75445 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC10.06□□□□□ -0.8
USH2AO75445 AL158047.1-201ENST00000445918 881 ntBASIC10.06□□□□□ -0.8
USH2AO75445 AC231657.2-201ENST00000624556 255 ntBASIC10.06□□□□□ -0.8
USH2AO75445 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms