Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NCK2O43639 AC099791.1-201ENST00000416440 715 ntBASIC24.45■■□□□ 1.5
NCK2O43639 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.45■■□□□ 1.5
NCK2O43639 AC034268.1-201ENST00000441047 882 ntBASIC24.45■■□□□ 1.5
NCK2O43639 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.45■■□□□ 1.5
NCK2O43639 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.45■■□□□ 1.5
NCK2O43639 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NCK2O43639 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NCK2O43639 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
NCK2O43639 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NCK2O43639 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
NCK2O43639 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
NCK2O43639 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.44■■□□□ 1.5
NCK2O43639 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.44■■□□□ 1.5
NCK2O43639 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NCK2O43639 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NCK2O43639 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NCK2O43639 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
NCK2O43639 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
NCK2O43639 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
NCK2O43639 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.43■■□□□ 1.5
NCK2O43639 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
NCK2O43639 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.43■■□□□ 1.5
NCK2O43639 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.43■■□□□ 1.5
NCK2O43639 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NCK2O43639 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
NCK2O43639 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NCK2O43639 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.42■■□□□ 1.5
NCK2O43639 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
NCK2O43639 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NCK2O43639 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.42■■□□□ 1.5
NCK2O43639 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.42■■□□□ 1.5
NCK2O43639 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.42■■□□□ 1.5
NCK2O43639 AC099791.2-201ENST00000605725 427 ntBASIC24.42■■□□□ 1.5
NCK2O43639 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.42■■□□□ 1.5
NCK2O43639 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
NCK2O43639 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.42■■□□□ 1.5
NCK2O43639 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
NCK2O43639 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NCK2O43639 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.41■■□□□ 1.5
NCK2O43639 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NCK2O43639 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
NCK2O43639 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
NCK2O43639 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NCK2O43639 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
NCK2O43639 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
NCK2O43639 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NCK2O43639 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
NCK2O43639 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 AL137784.2-201ENST00000607332 1000 ntBASIC24.4■■□□□ 1.5
NCK2O43639 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
NCK2O43639 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NCK2O43639 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NCK2O43639 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.4■■□□□ 1.5
NCK2O43639 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.4■■□□□ 1.5
NCK2O43639 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
NCK2O43639 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NCK2O43639 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
NCK2O43639 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NCK2O43639 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NCK2O43639 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NCK2O43639 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.39■■□□□ 1.49
NCK2O43639 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.39■■□□□ 1.49
NCK2O43639 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NCK2O43639 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NCK2O43639 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.39■■□□□ 1.49
NCK2O43639 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.38■■□□□ 1.49
NCK2O43639 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.38■■□□□ 1.49
NCK2O43639 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCK2O43639 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCK2O43639 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.38■■□□□ 1.49
NCK2O43639 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCK2O43639 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCK2O43639 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NCK2O43639 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.38■■□□□ 1.49
NCK2O43639 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.38■■□□□ 1.49
NCK2O43639 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.38■■□□□ 1.49
NCK2O43639 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms