Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 AC087742.1-201ENST00000575880 1738 ntBASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV27A0A0K0K1C4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.71■□□□□ 0.1
TRBV27A0A0K0K1C4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.71■□□□□ 0.1
TRBV27A0A0K0K1C4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
TRBV27A0A0K0K1C4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.71■□□□□ 0.1
TRBV27A0A0K0K1C4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV27A0A0K0K1C4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 AC019171.1-201ENST00000601251 1056 ntBASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV27A0A0K0K1C4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV27A0A0K0K1C4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV27A0A0K0K1C4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 AC004448.1-201ENST00000458332 883 ntBASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV27A0A0K0K1C4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms