Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 KRT41P-201ENST00000393988 1293 ntBASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AL021407.3-201ENST00000407522 486 ntBASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 APRT-202ENST00000426324 664 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 MTND6P7-201ENST00000433237 524 ntBASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC087893.1-201ENST00000612818 664 ntBASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTF1AQ7RTS3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 AL049597.1-201ENST00000447415 555 ntBASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 TSACC-206ENST00000466306 477 ntTSL 3 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 AC010442.2-201ENST00000509301 407 ntBASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 GAPDHP76-201ENST00000512278 976 ntBASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 RBP5-202ENST00000542370 564 ntTSL 2 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 WSB1-213ENST00000583193 552 ntTSL 4 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 snoZ6.3-201ENST00000583496 76 ntBASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 AL353997.3-201ENST00000586597 589 ntBASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 MED25-209ENST00000612791 881 ntTSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 AL390755.1-201ENST00000623716 2027 ntBASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.9■□□□□ 0.3
PTF1AQ7RTS3 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC16.89■□□□□ 0.3
PTF1AQ7RTS3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PTF1AQ7RTS3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTF1AQ7RTS3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PTF1AQ7RTS3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.89■□□□□ 0.3
PTF1AQ7RTS3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PTF1AQ7RTS3 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 LDHAL6FP-201ENST00000405916 1082 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 RPL19P20-201ENST00000415648 591 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC096919.1-201ENST00000472730 652 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC080038.2-201ENST00000617734 423 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC130469.2-201ENST00000625112 1092 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 UBR1-212ENST00000627960 189 ntTSL 5 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AL139823.1-201ENST00000641871 1225 ntBASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTF1AQ7RTS3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms