Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 IGHV1OR16-3-201ENST00000568138 205 ntBASIC16.52■□□□□ 0.24
PDE6BP35913 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC16.52■□□□□ 0.24
PDE6BP35913 MIR4640-201ENST00000581824 90 ntBASIC16.52■□□□□ 0.24
PDE6BP35913 MIR4309-201ENST00000582498 83 ntBASIC16.52■□□□□ 0.24
PDE6BP35913 TLE2-205ENST00000586422 389 ntTSL 5 BASIC16.52■□□□□ 0.24
PDE6BP35913 PPY-202ENST00000587006 431 ntTSL 3 BASIC16.52■□□□□ 0.24
PDE6BP35913 AC090950.1-202ENST00000605733 644 ntBASIC16.52■□□□□ 0.24
PDE6BP35913 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC16.52■□□□□ 0.24
PDE6BP35913 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC16.52■□□□□ 0.24
PDE6BP35913 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDE6BP35913 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDE6BP35913 CLUHP8-201ENST00000547527 1485 ntBASIC16.52■□□□□ 0.23
PDE6BP35913 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDE6BP35913 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC16.52■□□□□ 0.23
PDE6BP35913 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PDE6BP35913 ZDHHC8P1-202ENST00000418264 1403 ntBASIC16.52■□□□□ 0.23
PDE6BP35913 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PDE6BP35913 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PDE6BP35913 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.52■□□□□ 0.23
PDE6BP35913 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PDE6BP35913 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PDE6BP35913 MIR766-201ENST00000390223 111 ntBASIC16.51■□□□□ 0.23
PDE6BP35913 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC16.51■□□□□ 0.23
PDE6BP35913 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC16.51■□□□□ 0.23
PDE6BP35913 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 AL137077.1-201ENST00000442115 528 ntBASIC16.51■□□□□ 0.23
PDE6BP35913 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC16.51■□□□□ 0.23
PDE6BP35913 AC104117.4-201ENST00000521486 847 ntBASIC16.51■□□□□ 0.23
PDE6BP35913 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDE6BP35913 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.51■□□□□ 0.23
PDE6BP35913 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PDE6BP35913 TUBB8P5-201ENST00000445286 1351 ntBASIC16.51■□□□□ 0.23
PDE6BP35913 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC16.51■□□□□ 0.23
PDE6BP35913 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 AC106785.2-201ENST00000564385 1319 ntBASIC16.5■□□□□ 0.23
PDE6BP35913 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 AC124319.4-201ENST00000622931 2161 ntBASIC16.5■□□□□ 0.23
PDE6BP35913 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 BX088651.3-201ENST00000418155 352 ntBASIC16.5■□□□□ 0.23
PDE6BP35913 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC16.5■□□□□ 0.23
PDE6BP35913 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC16.5■□□□□ 0.23
PDE6BP35913 AC067942.1-202ENST00000471756 1057 ntBASIC16.5■□□□□ 0.23
PDE6BP35913 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 AL136298.3-201ENST00000556746 445 ntBASIC16.5■□□□□ 0.23
PDE6BP35913 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC16.5■□□□□ 0.23
PDE6BP35913 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC16.5■□□□□ 0.23
PDE6BP35913 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms