Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 MIR497HG-202ENST00000572453 3838 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.18□□□□□ -0.46
ZIC3O60481 AC104961.1-201ENST00000427605 771 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 RPL13AP19-201ENST00000434320 584 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.18□□□□□ -0.46
ZIC3O60481 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ZIC3O60481 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.18□□□□□ -0.46
ZIC3O60481 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.18□□□□□ -0.46
ZIC3O60481 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 AL591926.3-201ENST00000611630 238 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 AC113385.2-201ENST00000614465 762 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ZIC3O60481 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 AC012358.2-201ENST00000430010 1434 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.18□□□□□ -0.46
ZIC3O60481 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A21P-201ENST00000510875 1396 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A15P-201ENST00000514465 1395 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A6P-201ENST00000515148 1394 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A16P-201ENST00000526662 1395 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A9P-201ENST00000527940 1395 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A5P-201ENST00000528738 1395 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A14P-201ENST00000530386 1395 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FAM90A13P-201ENST00000534703 1395 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 FKBP4P8-201ENST00000610931 1369 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.17□□□□□ -0.46
ZIC3O60481 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZIC3O60481 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ZIC3O60481 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ZIC3O60481 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZIC3O60481 OR7E155P-201ENST00000412208 1014 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms