Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AC099689.1-201ENST00000624383 1302 ntBASIC12.41□□□□□ -0.42
CACNA1BQ00975 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 GYG2P1-203ENST00000382965 149 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC006022.1-201ENST00000425261 388 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 C2orf27AP2-201ENST00000438438 555 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 AP000343.1-201ENST00000440602 385 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC117500.5-201ENST00000623233 527 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC092471.2-201ENST00000637219 651 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC139749.1-202ENST00000617529 3139 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 PDHX-202ENST00000430469 952 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC109631.1-201ENST00000559695 781 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AKR1B1P7-201ENST00000587229 952 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC006557.1-201ENST00000591211 1085 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC023024.2-201ENST00000623561 1993 ntBASIC12.4□□□□□ -0.42
CACNA1BQ00975 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CACNA1BQ00975 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CACNA1BQ00975 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.4□□□□□ -0.43
CACNA1BQ00975 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC12.4□□□□□ -0.43
CACNA1BQ00975 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CACNA1BQ00975 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
CACNA1BQ00975 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.4□□□□□ -0.43
CACNA1BQ00975 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.4□□□□□ -0.43
CACNA1BQ00975 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
CACNA1BQ00975 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CACNA1BQ00975 INTS4P1-203ENST00000641008 3683 ntBASIC12.4□□□□□ -0.43
CACNA1BQ00975 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CACNA1BQ00975 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CACNA1BQ00975 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 AC103592.1-201ENST00000394513 664 ntBASIC12.39□□□□□ -0.43
CACNA1BQ00975 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 AL035250.2-201ENST00000440889 620 ntTSL 3 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 TMX3-202ENST00000443099 913 ntTSL 2 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 DDTP1-201ENST00000443589 383 ntBASIC12.39□□□□□ -0.43
CACNA1BQ00975 RN7SL483P-201ENST00000478417 285 ntBASIC12.39□□□□□ -0.43
CACNA1BQ00975 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC12.39□□□□□ -0.43
CACNA1BQ00975 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms