Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 TMBIM7P-202ENST00000641474 1516 ntBASIC13.5□□□□□ -0.25
SOX11P35716 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX11P35716 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SOX11P35716 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX11P35716 AL391647.1-201ENST00000395664 511 ntBASIC13.5□□□□□ -0.25
SOX11P35716 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX11P35716 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 EEF1DP6-201ENST00000449232 372 ntBASIC13.5□□□□□ -0.25
SOX11P35716 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.5□□□□□ -0.25
SOX11P35716 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX11P35716 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX11P35716 AC026616.1-201ENST00000523157 525 ntBASIC13.5□□□□□ -0.25
SOX11P35716 RTN3P1-201ENST00000536295 711 ntBASIC13.5□□□□□ -0.25
SOX11P35716 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.5□□□□□ -0.25
SOX11P35716 PRKXP1-201ENST00000561423 1122 ntBASIC13.5□□□□□ -0.25
SOX11P35716 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX11P35716 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.5□□□□□ -0.25
SOX11P35716 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.5□□□□□ -0.25
SOX11P35716 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.5□□□□□ -0.25
SOX11P35716 AC026790.2-201ENST00000606282 430 ntBASIC13.5□□□□□ -0.25
SOX11P35716 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX11P35716 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SOX11P35716 AC010336.1-201ENST00000539278 4739 ntBASIC13.5□□□□□ -0.25
SOX11P35716 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SOX11P35716 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX11P35716 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX11P35716 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX11P35716 AC060814.4-201ENST00000594169 2163 ntBASIC13.49□□□□□ -0.25
SOX11P35716 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SOX11P35716 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SOX11P35716 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SOX11P35716 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX11P35716 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SOX11P35716 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX11P35716 KRT18P36-201ENST00000411618 1276 ntBASIC13.49□□□□□ -0.25
SOX11P35716 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX11P35716 XBP1P1-201ENST00000436573 652 ntBASIC13.49□□□□□ -0.25
SOX11P35716 CEP164P1-201ENST00000455142 418 ntBASIC13.49□□□□□ -0.25
SOX11P35716 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX11P35716 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.49□□□□□ -0.25
SOX11P35716 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX11P35716 POU5F1P2-201ENST00000521750 823 ntBASIC13.49□□□□□ -0.25
SOX11P35716 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX11P35716 AC112187.3-201ENST00000607844 408 ntBASIC13.49□□□□□ -0.25
SOX11P35716 AL109924.4-201ENST00000623089 670 ntBASIC13.49□□□□□ -0.25
SOX11P35716 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.49□□□□□ -0.25
SOX11P35716 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX11P35716 AL355102.3-201ENST00000554299 1678 ntBASIC13.49□□□□□ -0.25
SOX11P35716 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 AL359845.1-201ENST00000458202 1648 ntBASIC13.49□□□□□ -0.25
SOX11P35716 AC115284.2-201ENST00000624646 2054 ntBASIC13.49□□□□□ -0.25
SOX11P35716 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX11P35716 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms