Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
GFRA1P56159 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
GFRA1P56159 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GFRA1P56159 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.18□□□□□ -0.46
GFRA1P56159 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.18□□□□□ -0.46
GFRA1P56159 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 AL445250.1-201ENST00000641671 2259 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
GFRA1P56159 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 GEMIN8P4-201ENST00000380526 729 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 MIR1301-201ENST00000408518 82 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 OR7E155P-201ENST00000412208 1014 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 AC104961.1-201ENST00000427605 771 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.17□□□□□ -0.46
GFRA1P56159 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.17□□□□□ -0.46
GFRA1P56159 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.17□□□□□ -0.46
GFRA1P56159 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.17□□□□□ -0.46
GFRA1P56159 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.17□□□□□ -0.46
GFRA1P56159 CYP4F36P-201ENST00000589193 186 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 FO393412.1-201ENST00000619841 382 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 AP000769.1-203ENST00000637245 208 ntBASIC12.17□□□□□ -0.46
GFRA1P56159 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
GFRA1P56159 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
GFRA1P56159 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.17□□□□□ -0.46
GFRA1P56159 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GFRA1P56159 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.17□□□□□ -0.46
GFRA1P56159 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GFRA1P56159 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms