Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 MIR1909-201ENST00000411312 80 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.63■□□□□ 0.09
CLCN1P35523 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 HOMER2P2-201ENST00000451621 847 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 AC100850.1-201ENST00000506768 649 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.63■□□□□ 0.09
CLCN1P35523 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.63■□□□□ 0.09
CLCN1P35523 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 RAB43P1-201ENST00000561790 589 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 MIR4783-201ENST00000580343 82 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC15.63■□□□□ 0.09
CLCN1P35523 AC079791.1-201ENST00000605356 973 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 MIR6775-201ENST00000617557 69 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 PISD-203ENST00000397500 2194 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.62■□□□□ 0.09
CLCN1P35523 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 MIR326-201ENST00000362220 95 ntBASIC15.62■□□□□ 0.09
CLCN1P35523 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 AL161932.2-201ENST00000435436 679 ntBASIC15.62■□□□□ 0.09
CLCN1P35523 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCN1P35523 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 AP001462.1-201ENST00000594089 452 ntBASIC15.62■□□□□ 0.09
CLCN1P35523 AC239800.4-201ENST00000603712 296 ntBASIC15.62■□□□□ 0.09
CLCN1P35523 AL137246.1-201ENST00000607072 977 ntBASIC15.62■□□□□ 0.09
CLCN1P35523 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCN1P35523 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCN1P35523 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCN1P35523 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCN1P35523 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms