Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 NBPF17P-201ENST00000401087 2119 ntBASIC11.51□□□□□ -0.57
CD74P04233 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
CD74P04233 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 BX679664.3-201ENST00000414070 555 ntBASIC11.51□□□□□ -0.57
CD74P04233 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 AC005722.1-201ENST00000431878 964 ntBASIC11.51□□□□□ -0.57
CD74P04233 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 AC113935.1-201ENST00000471722 555 ntBASIC11.51□□□□□ -0.57
CD74P04233 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 AC005740.1-201ENST00000515639 522 ntBASIC11.51□□□□□ -0.57
CD74P04233 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.51□□□□□ -0.57
CD74P04233 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 AC015936.2-201ENST00000593177 259 ntBASIC11.51□□□□□ -0.57
CD74P04233 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CD74P04233 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 UBTFL8-201ENST00000426903 2112 ntBASIC11.51□□□□□ -0.57
CD74P04233 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CD74P04233 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 AC080013.1-204ENST00000607426 2185 ntBASIC11.51□□□□□ -0.57
CD74P04233 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.51□□□□□ -0.57
CD74P04233 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 KRT8P43-201ENST00000406052 1458 ntBASIC11.51□□□□□ -0.57
CD74P04233 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.5□□□□□ -0.57
CD74P04233 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.5□□□□□ -0.57
CD74P04233 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC11.5□□□□□ -0.57
CD74P04233 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.5□□□□□ -0.57
CD74P04233 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 SCARNA21-201ENST00000517026 139 ntBASIC11.5□□□□□ -0.57
CD74P04233 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.5□□□□□ -0.57
CD74P04233 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.5□□□□□ -0.57
CD74P04233 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.5□□□□□ -0.57
CD74P04233 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 AC093752.3-201ENST00000567343 901 ntBASIC11.5□□□□□ -0.57
CD74P04233 AC233724.13-201ENST00000598383 410 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms