Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6P35125 RBM22P2-201ENST00000393978 1814 ntBASIC17.98■□□□□ 0.47
USP6P35125 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
USP6P35125 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP6P35125 TCAF1P1-201ENST00000414990 2232 ntBASIC17.98■□□□□ 0.47
USP6P35125 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 RN7SL846P-201ENST00000467429 292 ntBASIC17.98■□□□□ 0.47
USP6P35125 FTH1-205ENST00000529631 507 ntTSL 4 BASIC17.98■□□□□ 0.47
USP6P35125 MYL6-210ENST00000548400 573 ntTSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 AC104759.1-201ENST00000559109 939 ntBASIC17.98■□□□□ 0.47
USP6P35125 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 RN7SL678P-201ENST00000579533 299 ntBASIC17.98■□□□□ 0.47
USP6P35125 NF1P11-201ENST00000621292 1282 ntBASIC17.98■□□□□ 0.47
USP6P35125 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6P35125 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
USP6P35125 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
USP6P35125 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.97■□□□□ 0.47
USP6P35125 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6P35125 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
USP6P35125 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC17.97■□□□□ 0.47
USP6P35125 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.97■□□□□ 0.47
USP6P35125 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
USP6P35125 ALDOAP1-201ENST00000491506 1078 ntBASIC17.97■□□□□ 0.47
USP6P35125 AL450346.2-201ENST00000495602 1024 ntBASIC17.97■□□□□ 0.47
USP6P35125 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
USP6P35125 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC17.97■□□□□ 0.47
USP6P35125 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
USP6P35125 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6P35125 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
USP6P35125 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
USP6P35125 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
USP6P35125 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC17.96■□□□□ 0.47
USP6P35125 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 DTX2P1-201ENST00000425797 1633 ntBASIC17.96■□□□□ 0.47
USP6P35125 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
USP6P35125 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
USP6P35125 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC17.96■□□□□ 0.47
USP6P35125 CA5BP1-205ENST00000435806 1064 ntBASIC17.96■□□□□ 0.47
USP6P35125 RPS15P5-201ENST00000449885 432 ntBASIC17.96■□□□□ 0.47
USP6P35125 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6P35125 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 AC005332.2-201ENST00000590010 930 ntBASIC17.96■□□□□ 0.47
USP6P35125 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC17.96■□□□□ 0.47
USP6P35125 C2orf27AP1-201ENST00000618128 586 ntBASIC17.96■□□□□ 0.47
USP6P35125 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.96■□□□□ 0.47
USP6P35125 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6P35125 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC17.96■□□□□ 0.47
USP6P35125 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
USP6P35125 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
USP6P35125 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP6P35125 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP6P35125 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC17.95■□□□□ 0.46
USP6P35125 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC17.95■□□□□ 0.46
USP6P35125 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP6P35125 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP6P35125 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP6P35125 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP6P35125 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms