Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MIPEPP1-201ENST00000413533 2027 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC073263.2-201ENST00000624835 1863 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 RN7SKP245-201ENST00000364025 320 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 HINT1-204ENST00000506908 681 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC091941.1-201ENST00000623003 576 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 CES1P1-201ENST00000421606 1704 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 DDC-206ENST00000431062 1620 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 FAM90A22P-201ENST00000400142 1395 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AL021407.3-201ENST00000407522 486 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC233724.7-201ENST00000511476 253 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC073862.5-201ENST00000624129 2027 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC016304.1-201ENST00000476363 413 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 MIR2277-201ENST00000515916 93 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AL022323.5-201ENST00000624101 2059 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC135782.3-201ENST00000562782 2105 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 GAPDHP65-201ENST00000425487 1006 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AL049542.1-201ENST00000430231 278 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 COQ5-202ENST00000445328 992 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC105105.4-201ENST00000610389 713 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC090093.1-201ENST00000611315 271 ntBASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS13DQ5THJ4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms