Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NLRC5-217ENST00000539144 6505 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TARS-202ENST00000455217 2523 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ABCC11-204ENST00000394748 4576 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 FMO6P-205ENST00000639957 1597 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ARHGAP19-SLIT1-202ENST00000479633 1876 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 MTCO1P8-201ENST00000416914 1523 ntBASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 TPK1-203ENST00000378099 2283 ntTSL 3 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 AC084759.3-201ENST00000624468 3944 ntBASIC8.08□□□□□ -1.12
SVIPQ8NHG7 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC8.08□□□□□ -1.12
SVIPQ8NHG7 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 MAP6-204ENST00000526740 1755 ntTSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 RCBTB2P1-201ENST00000453021 1462 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 GPATCH2-201ENST00000366934 3218 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 OR2A9P-204ENST00000641566 2029 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 IGSF11-208ENST00000489689 3320 ntTSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 NCOA6-201ENST00000359003 7081 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC010883.1-201ENST00000423354 398 ntTSL 3 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 SLC25A6P3-201ENST00000424829 879 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AL713998.2-201ENST00000604538 1198 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AL034408.1-201ENST00000637712 664 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC110716.2-201ENST00000563865 3945 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 SP100-202ENST00000340126 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 OPRM1-209ENST00000435918 2217 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CELF2-207ENST00000609692 2210 ntTSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 HSPA8P9-201ENST00000485881 1943 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AL662907.1-201ENST00000622988 1360 ntBASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 AC062029.1-201ENST00000453008 1614 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SVIPQ8NHG7 CHODL-205ENST00000400131 2036 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms