Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PGAM1P5-201ENST00000548011 764 ntBASIC15.5■□□□□ 0.07
TPM3P06753 AC003686.1-201ENST00000550956 1034 ntBASIC15.5■□□□□ 0.07
TPM3P06753 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM3P06753 C2orf69P2-201ENST00000562032 1123 ntBASIC15.5■□□□□ 0.07
TPM3P06753 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 AC022497.1-201ENST00000624916 3691 ntBASIC15.5■□□□□ 0.07
TPM3P06753 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.49■□□□□ 0.07
TPM3P06753 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TPM3P06753 AHCYP2-201ENST00000430630 1300 ntBASIC15.49■□□□□ 0.07
TPM3P06753 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 KCTD21-AS1-207ENST00000600795 1549 ntBASIC15.49■□□□□ 0.07
TPM3P06753 GUCY2EP-203ENST00000531117 1918 ntBASIC15.49■□□□□ 0.07
TPM3P06753 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 PES1-205ENST00000405677 2708 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 AC006001.1-201ENST00000325130 474 ntBASIC15.49■□□□□ 0.07
TPM3P06753 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 AC098614.1-201ENST00000368528 745 ntBASIC15.49■□□□□ 0.07
TPM3P06753 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.49■□□□□ 0.07
TPM3P06753 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TPM3P06753 MIR770-201ENST00000390219 98 ntBASIC15.49■□□□□ 0.07
TPM3P06753 MIR1202-201ENST00000408529 83 ntBASIC15.49■□□□□ 0.07
TPM3P06753 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 HOMER2P2-201ENST00000451621 847 ntBASIC15.49■□□□□ 0.07
TPM3P06753 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.49■□□□□ 0.07
TPM3P06753 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.49■□□□□ 0.07
TPM3P06753 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 KRT90P-201ENST00000549264 1064 ntBASIC15.49■□□□□ 0.07
TPM3P06753 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.49■□□□□ 0.07
TPM3P06753 RN7SL204P-201ENST00000582831 262 ntBASIC15.49■□□□□ 0.07
TPM3P06753 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM3P06753 AC233724.13-201ENST00000598383 410 ntBASIC15.49■□□□□ 0.07
TPM3P06753 AL355385.1-201ENST00000606123 409 ntBASIC15.49■□□□□ 0.07
TPM3P06753 AC010503.4-201ENST00000615487 688 ntBASIC15.49■□□□□ 0.07
TPM3P06753 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TPM3P06753 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM3P06753 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TPM3P06753 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TPM3P06753 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 AC091181.1-201ENST00000623762 2098 ntBASIC15.48■□□□□ 0.07
TPM3P06753 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 AC144522.1-201ENST00000625111 1658 ntBASIC15.48■□□□□ 0.07
TPM3P06753 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 AR-208ENST00000612452 10676 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM3P06753 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TPM3P06753 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM3P06753 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms