Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 CICP2-201ENST00000420675 2328 ntBASIC12.32□□□□□ -0.44
APOA1P02647 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 AP000593.2-201ENST00000542775 1433 ntBASIC12.32□□□□□ -0.44
APOA1P02647 HERC2P10-201ENST00000570209 2393 ntBASIC12.32□□□□□ -0.44
APOA1P02647 AC100757.3-201ENST00000622361 1406 ntBASIC12.32□□□□□ -0.44
APOA1P02647 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.32□□□□□ -0.44
APOA1P02647 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.32□□□□□ -0.44
APOA1P02647 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.32□□□□□ -0.44
APOA1P02647 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.32□□□□□ -0.44
APOA1P02647 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.32□□□□□ -0.44
APOA1P02647 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.32□□□□□ -0.44
APOA1P02647 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.32□□□□□ -0.44
APOA1P02647 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
APOA1P02647 AC140878.1-201ENST00000565277 250 ntBASIC12.32□□□□□ -0.44
APOA1P02647 AC124283.3-201ENST00000570869 594 ntBASIC12.32□□□□□ -0.44
APOA1P02647 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.32□□□□□ -0.44
APOA1P02647 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.32□□□□□ -0.44
APOA1P02647 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
APOA1P02647 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.31□□□□□ -0.44
APOA1P02647 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.31□□□□□ -0.44
APOA1P02647 SOCS2P1-201ENST00000417727 557 ntBASIC12.31□□□□□ -0.44
APOA1P02647 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.31□□□□□ -0.44
APOA1P02647 AL035414.1-201ENST00000451327 857 ntBASIC12.31□□□□□ -0.44
APOA1P02647 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.31□□□□□ -0.44
APOA1P02647 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.31□□□□□ -0.44
APOA1P02647 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.31□□□□□ -0.44
APOA1P02647 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.31□□□□□ -0.44
APOA1P02647 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
APOA1P02647 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.31□□□□□ -0.44
APOA1P02647 AL590560.3-201ENST00000623350 461 ntBASIC12.31□□□□□ -0.44
APOA1P02647 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOA1P02647 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms