Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 AC090192.1-201ENST00000517740 490 ntBASIC29.42■■■□□ 2.3
SPG7Q9UQ90 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 AL137784.2-201ENST00000607332 1000 ntBASIC29.42■■■□□ 2.3
SPG7Q9UQ90 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
SPG7Q9UQ90 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.41■■■□□ 2.3
SPG7Q9UQ90 CCDC92B-201ENST00000575506 885 ntBASIC29.41■■■□□ 2.3
SPG7Q9UQ90 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
SPG7Q9UQ90 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SPG7Q9UQ90 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.41■■■□□ 2.3
SPG7Q9UQ90 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 AP005435.1-201ENST00000529293 1178 ntBASIC29.4■■■□□ 2.3
SPG7Q9UQ90 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 AC144652.1-201ENST00000609974 1624 ntBASIC29.4■■■□□ 2.3
SPG7Q9UQ90 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
SPG7Q9UQ90 LINC01529-204ENST00000636474 1715 ntBASIC29.4■■■□□ 2.3
SPG7Q9UQ90 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
SPG7Q9UQ90 AC092437.1-201ENST00000624794 1048 ntBASIC29.39■■■□□ 2.3
SPG7Q9UQ90 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
SPG7Q9UQ90 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
SPG7Q9UQ90 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SPG7Q9UQ90 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
SPG7Q9UQ90 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SPG7Q9UQ90 AC142381.3-201ENST00000568208 1670 ntBASIC29.38■■■□□ 2.29
SPG7Q9UQ90 LHPP-203ENST00000392757 840 ntTSL 3 BASIC29.38■■■□□ 2.29
SPG7Q9UQ90 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.38■■■□□ 2.29
SPG7Q9UQ90 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SPG7Q9UQ90 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SPG7Q9UQ90 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
SPG7Q9UQ90 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SPG7Q9UQ90 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SPG7Q9UQ90 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SPG7Q9UQ90 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SPG7Q9UQ90 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SPG7Q9UQ90 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC29.37■■■□□ 2.29
SPG7Q9UQ90 AC138932.3-201ENST00000567634 1902 ntBASIC29.37■■■□□ 2.29
SPG7Q9UQ90 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SPG7Q9UQ90 TERF1P2-201ENST00000583350 1212 ntBASIC29.35■■■□□ 2.29
SPG7Q9UQ90 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.35■■■□□ 2.29
SPG7Q9UQ90 LINC02228-203ENST00000641970 1355 ntBASIC29.35■■■□□ 2.29
SPG7Q9UQ90 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SPG7Q9UQ90 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPG7Q9UQ90 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPG7Q9UQ90 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 KRT18P14-201ENST00000534205 1250 ntBASIC29.34■■■□□ 2.29
SPG7Q9UQ90 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.34■■■□□ 2.29
SPG7Q9UQ90 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms