Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GSX1Q9H4S2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.85■□□□□ 0.61
GSX1Q9H4S2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.85■□□□□ 0.61
GSX1Q9H4S2 AC009086.3-201ENST00000623486 1008 ntBASIC18.85■□□□□ 0.61
GSX1Q9H4S2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GSX1Q9H4S2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.85■□□□□ 0.61
GSX1Q9H4S2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 TSPY20P-201ENST00000450910 630 ntBASIC18.84■□□□□ 0.61
GSX1Q9H4S2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 TERF1P2-201ENST00000583350 1212 ntBASIC18.84■□□□□ 0.61
GSX1Q9H4S2 AL109923.1-201ENST00000618799 583 ntBASIC18.84■□□□□ 0.61
GSX1Q9H4S2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
GSX1Q9H4S2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GSX1Q9H4S2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GSX1Q9H4S2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.83■□□□□ 0.61
GSX1Q9H4S2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GSX1Q9H4S2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 MIR572-201ENST00000384983 95 ntBASIC18.83■□□□□ 0.6
GSX1Q9H4S2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GSX1Q9H4S2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.82■□□□□ 0.6
GSX1Q9H4S2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 AC026185.1-201ENST00000445748 174 ntBASIC18.81■□□□□ 0.6
GSX1Q9H4S2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 CD99P1-205ENST00000527459 561 ntBASIC18.81■□□□□ 0.6
GSX1Q9H4S2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 AL354811.1-201ENST00000610286 706 ntBASIC18.81■□□□□ 0.6
GSX1Q9H4S2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GSX1Q9H4S2 LINC02228-203ENST00000641970 1355 ntBASIC18.81■□□□□ 0.6
GSX1Q9H4S2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 AC006015.1-201ENST00000429970 570 ntBASIC18.8■□□□□ 0.6
GSX1Q9H4S2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GSX1Q9H4S2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 AC016769.1-201ENST00000409132 1010 ntBASIC18.79■□□□□ 0.6
GSX1Q9H4S2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
GSX1Q9H4S2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 AC006970.2-201ENST00000450065 779 ntBASIC18.78■□□□□ 0.6
GSX1Q9H4S2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 pRNA.6-201ENST00000610482 90 ntBASIC18.78■□□□□ 0.6
GSX1Q9H4S2 pRNA.5-201ENST00000612139 90 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms