Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC091305.1-201ENST00000479476 895 ntBASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 DUX4L19-201ENST00000557448 1267 ntBASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 AC011298.3-201ENST00000615796 283 ntBASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 MIR6084-201ENST00000622012 110 ntBASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
KRTAP4-3Q9BYR4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 RASA4CP-201ENST00000424092 1398 ntBASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 GRAMD4P2-201ENST00000423297 1097 ntBASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 ANKRD20A6P-201ENST00000618763 204 ntBASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AC241377.3-202ENST00000626088 1088 ntBASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AC241585.3-202ENST00000628937 1088 ntBASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AC245100.8-202ENST00000629247 1058 ntBASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
KRTAP4-3Q9BYR4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AC133637.1-201ENST00000624115 1537 ntBASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AC027682.1-201ENST00000562846 899 ntBASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AC233992.3-201ENST00000607491 485 ntBASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 SP2-202ENST00000613139 908 ntTSL 5 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
KRTAP4-3Q9BYR4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms