Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM9SF2Q99805 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.54■□□□□ 0.88
TM9SF2Q99805 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM9SF2Q99805 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.54■□□□□ 0.88
TM9SF2Q99805 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TM9SF2Q99805 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM9SF2Q99805 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
TM9SF2Q99805 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.53■□□□□ 0.88
TM9SF2Q99805 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.53■□□□□ 0.88
TM9SF2Q99805 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TM9SF2Q99805 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF2Q99805 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TM9SF2Q99805 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TM9SF2Q99805 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TM9SF2Q99805 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF2Q99805 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF2Q99805 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF2Q99805 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF2Q99805 AL022069.1-201ENST00000568025 1636 ntBASIC20.52■□□□□ 0.88
TM9SF2Q99805 AC019069.1-201ENST00000610008 1333 ntBASIC20.52■□□□□ 0.87
TM9SF2Q99805 AC005703.6-201ENST00000623265 1329 ntBASIC20.52■□□□□ 0.87
TM9SF2Q99805 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF2Q99805 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF2Q99805 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
TM9SF2Q99805 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TM9SF2Q99805 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TM9SF2Q99805 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.51■□□□□ 0.87
TM9SF2Q99805 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TM9SF2Q99805 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF2Q99805 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.51■□□□□ 0.87
TM9SF2Q99805 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF2Q99805 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF2Q99805 LINC00565-201ENST00000562710 2331 ntBASIC20.5■□□□□ 0.87
TM9SF2Q99805 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF2Q99805 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.5■□□□□ 0.87
TM9SF2Q99805 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF2Q99805 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF2Q99805 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.5■□□□□ 0.87
TM9SF2Q99805 AL512631.2-201ENST00000604634 923 ntBASIC20.5■□□□□ 0.87
TM9SF2Q99805 MIR4466-201ENST00000606121 54 ntBASIC20.5■□□□□ 0.87
TM9SF2Q99805 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TM9SF2Q99805 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.5■□□□□ 0.87
TM9SF2Q99805 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF2Q99805 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TM9SF2Q99805 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 AC131274.2-201ENST00000580697 1507 ntBASIC20.49■□□□□ 0.87
TM9SF2Q99805 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TM9SF2Q99805 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF2Q99805 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF2Q99805 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF2Q99805 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF2Q99805 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TM9SF2Q99805 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF2Q99805 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 AL139246.5-201ENST00000606645 996 ntBASIC20.47■□□□□ 0.87
TM9SF2Q99805 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms