Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.5■■□□□ 1.03
NCLNQ969V3 SNX5-217ENST00000606557 1087 ntBASIC21.5■■□□□ 1.03
NCLNQ969V3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLNQ969V3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLNQ969V3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLNQ969V3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NCLNQ969V3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLNQ969V3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NCLNQ969V3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCLNQ969V3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCLNQ969V3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.49■■□□□ 1.03
NCLNQ969V3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.49■■□□□ 1.03
NCLNQ969V3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLNQ969V3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.49■■□□□ 1.03
NCLNQ969V3 AC010997.5-201ENST00000609182 354 ntBASIC21.49■■□□□ 1.03
NCLNQ969V3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLNQ969V3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCLNQ969V3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NCLNQ969V3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLNQ969V3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.49■■□□□ 1.03
NCLNQ969V3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLNQ969V3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLNQ969V3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLNQ969V3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLNQ969V3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NCLNQ969V3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLNQ969V3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLNQ969V3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.48■■□□□ 1.03
NCLNQ969V3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLNQ969V3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.48■■□□□ 1.03
NCLNQ969V3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLNQ969V3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLNQ969V3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLNQ969V3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLNQ969V3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLNQ969V3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
NCLNQ969V3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLNQ969V3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLNQ969V3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLNQ969V3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLNQ969V3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLNQ969V3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLNQ969V3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NCLNQ969V3 AL161729.1-201ENST00000604104 1402 ntBASIC21.46■■□□□ 1.03
NCLNQ969V3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLNQ969V3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.46■■□□□ 1.03
NCLNQ969V3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.46■■□□□ 1.03
NCLNQ969V3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLNQ969V3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NCLNQ969V3 AC131274.2-201ENST00000580697 1507 ntBASIC21.46■■□□□ 1.03
NCLNQ969V3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NCLNQ969V3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.46■■□□□ 1.03
NCLNQ969V3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLNQ969V3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NCLNQ969V3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.46■■□□□ 1.03
NCLNQ969V3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLNQ969V3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLNQ969V3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
NCLNQ969V3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.45■■□□□ 1.03
NCLNQ969V3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLNQ969V3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NCLNQ969V3 AC004448.1-201ENST00000458332 883 ntBASIC21.45■■□□□ 1.02
NCLNQ969V3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.45■■□□□ 1.02
NCLNQ969V3 AC131212.1-201ENST00000613771 668 ntBASIC21.45■■□□□ 1.02
NCLNQ969V3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLNQ969V3 AC092068.2-201ENST00000590491 1708 ntBASIC21.45■■□□□ 1.02
NCLNQ969V3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCLNQ969V3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLNQ969V3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NCLNQ969V3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.44■■□□□ 1.02
NCLNQ969V3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.44■■□□□ 1.02
NCLNQ969V3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.44■■□□□ 1.02
NCLNQ969V3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NCLNQ969V3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.44■■□□□ 1.02
NCLNQ969V3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.44■■□□□ 1.02
NCLNQ969V3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCLNQ969V3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 DUSP8P3-201ENST00000399571 1760 ntBASIC21.43■■□□□ 1.02
NCLNQ969V3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.43■■□□□ 1.02
NCLNQ969V3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.43■■□□□ 1.02
NCLNQ969V3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.43■■□□□ 1.02
NCLNQ969V3 AL022069.1-201ENST00000568025 1636 ntBASIC21.43■■□□□ 1.02
NCLNQ969V3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.43■■□□□ 1.02
NCLNQ969V3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.43■■□□□ 1.02
NCLNQ969V3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCLNQ969V3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCLNQ969V3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.42■■□□□ 1.02
NCLNQ969V3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms