Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RAPGEF4Q8WZA2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RAPGEF4Q8WZA2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RAPGEF4Q8WZA2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.57■■■□□ 2.32
RAPGEF4Q8WZA2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.56■■■□□ 2.32
RAPGEF4Q8WZA2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 KRT18P14-201ENST00000534205 1250 ntBASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
RAPGEF4Q8WZA2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 LINC02228-203ENST00000641970 1355 ntBASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 AC004911.1-201ENST00000416316 871 ntBASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 TERF1P2-201ENST00000583350 1212 ntBASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 NTF6G-201ENST00000591094 616 ntBASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RAPGEF4Q8WZA2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 AP005435.1-201ENST00000529293 1178 ntBASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
RAPGEF4Q8WZA2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 LINC01529-204ENST00000636474 1715 ntBASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 AC144652.1-201ENST00000609974 1624 ntBASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC29.52■■■□□ 2.32
RAPGEF4Q8WZA2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
RAPGEF4Q8WZA2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.32
RAPGEF4Q8WZA2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC29.51■■■□□ 2.31
RAPGEF4Q8WZA2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF4Q8WZA2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF4Q8WZA2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms