Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 TERF1P2-201ENST00000583350 1212 ntBASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 LINC02228-203ENST00000641970 1355 ntBASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 AC144652.1-201ENST00000609974 1624 ntBASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.58■■□□□ 1.69
SHCBP1Q8NEM2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 KRT18P14-201ENST00000534205 1250 ntBASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 LINC01529-204ENST00000636474 1715 ntBASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SHCBP1Q8NEM2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SHCBP1Q8NEM2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHCBP1Q8NEM2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHCBP1Q8NEM2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.56■■□□□ 1.68
SHCBP1Q8NEM2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
SHCBP1Q8NEM2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHCBP1Q8NEM2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHCBP1Q8NEM2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 NTF6G-201ENST00000591094 616 ntBASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.54■■□□□ 1.68
SHCBP1Q8NEM2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHCBP1Q8NEM2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHCBP1Q8NEM2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHCBP1Q8NEM2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHCBP1Q8NEM2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SHCBP1Q8NEM2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHCBP1Q8NEM2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.5■■□□□ 1.67
SHCBP1Q8NEM2 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.5■■□□□ 1.67
SHCBP1Q8NEM2 AC142381.3-201ENST00000568208 1670 ntBASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms