Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC6AQ8NDV7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TNRC6AQ8NDV7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC6AQ8NDV7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.52■□□□□ 0.87
TNRC6AQ8NDV7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNRC6AQ8NDV7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNRC6AQ8NDV7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TNRC6AQ8NDV7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC6AQ8NDV7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 AC135731.1-201ENST00000569415 2548 ntBASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.5■□□□□ 0.87
TNRC6AQ8NDV7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC6AQ8NDV7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC6AQ8NDV7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 KRT18P61-201ENST00000585825 1298 ntBASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC6AQ8NDV7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 AL499627.2-201ENST00000606283 725 ntBASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC6AQ8NDV7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms