Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 MIR6722-201ENST00000617286 78 ntBASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF3Q3KNV8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 MIR6724-1-201ENST00000616420 92 ntBASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 MIR6724-2-201ENST00000616483 92 ntBASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 MIR6724-4-201ENST00000617390 92 ntBASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 MIR6724-3-201ENST00000622482 92 ntBASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 C1orf229-201ENST00000623686 2258 ntBASIC19.62■□□□□ 0.73
PCGF3Q3KNV8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 AC004448.1-201ENST00000458332 883 ntBASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF3Q3KNV8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
PCGF3Q3KNV8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 AL161729.1-201ENST00000604104 1402 ntBASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF3Q3KNV8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 AL022069.1-201ENST00000568025 1636 ntBASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCGF3Q3KNV8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.58■□□□□ 0.72
PCGF3Q3KNV8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PCGF3Q3KNV8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCGF3Q3KNV8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCGF3Q3KNV8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCGF3Q3KNV8 LINC00526-201ENST00000581067 1875 ntBASIC19.58■□□□□ 0.72
PCGF3Q3KNV8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF3Q3KNV8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms