Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDX1P52945 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDX1P52945 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDX1P52945 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.65■■□□□ 1.06
PDX1P52945 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDX1P52945 SLC47A1P1-202ENST00000449666 945 ntBASIC21.65■■□□□ 1.06
PDX1P52945 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
PDX1P52945 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.65■■□□□ 1.06
PDX1P52945 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.65■■□□□ 1.06
PDX1P52945 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDX1P52945 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
PDX1P52945 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDX1P52945 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDX1P52945 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDX1P52945 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.64■■□□□ 1.05
PDX1P52945 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDX1P52945 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDX1P52945 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.63■■□□□ 1.05
PDX1P52945 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDX1P52945 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDX1P52945 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDX1P52945 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDX1P52945 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.63■■□□□ 1.05
PDX1P52945 AC126544.1-201ENST00000580842 1059 ntBASIC21.63■■□□□ 1.05
PDX1P52945 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDX1P52945 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDX1P52945 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDX1P52945 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDX1P52945 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.63■■□□□ 1.05
PDX1P52945 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDX1P52945 TSPY26P-201ENST00000476365 1326 ntBASIC21.62■■□□□ 1.05
PDX1P52945 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.62■■□□□ 1.05
PDX1P52945 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.62■■□□□ 1.05
PDX1P52945 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDX1P52945 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.62■■□□□ 1.05
PDX1P52945 YBX1P1-201ENST00000445822 960 ntBASIC21.62■■□□□ 1.05
PDX1P52945 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDX1P52945 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PDX1P52945 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.62■■□□□ 1.05
PDX1P52945 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
PDX1P52945 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDX1P52945 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDX1P52945 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.62■■□□□ 1.05
PDX1P52945 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDX1P52945 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.61■■□□□ 1.05
PDX1P52945 AC141586.4-201ENST00000624558 1573 ntBASIC21.61■■□□□ 1.05
PDX1P52945 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDX1P52945 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDX1P52945 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.61■■□□□ 1.05
PDX1P52945 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
PDX1P52945 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.61■■□□□ 1.05
PDX1P52945 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.61■■□□□ 1.05
PDX1P52945 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.6■■□□□ 1.05
PDX1P52945 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDX1P52945 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDX1P52945 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDX1P52945 AC034268.1-201ENST00000441047 882 ntBASIC21.6■■□□□ 1.05
PDX1P52945 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.6■■□□□ 1.05
PDX1P52945 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
PDX1P52945 IKBKGP1-201ENST00000612193 1073 ntBASIC21.6■■□□□ 1.05
PDX1P52945 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDX1P52945 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDX1P52945 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDX1P52945 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDX1P52945 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PDX1P52945 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.6■■□□□ 1.05
PDX1P52945 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PDX1P52945 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDX1P52945 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDX1P52945 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.59■■□□□ 1.05
PDX1P52945 KRT18P5-201ENST00000436075 1291 ntBASIC21.59■■□□□ 1.05
PDX1P52945 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDX1P52945 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDX1P52945 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDX1P52945 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.59■■□□□ 1.05
PDX1P52945 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDX1P52945 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDX1P52945 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
PDX1P52945 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L2-201ENST00000561772 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L6-201ENST00000626483 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L1-201ENST00000627662 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L8-201ENST00000629013 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L3-201ENST00000630187 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L7-201ENST00000630678 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 DUX4L5-201ENST00000630834 1275 ntBASIC21.58■■□□□ 1.05
PDX1P52945 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.58■■□□□ 1.05
PDX1P52945 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDX1P52945 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDX1P52945 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDX1P52945 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.57■■□□□ 1.04
PDX1P52945 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.57■■□□□ 1.04
PDX1P52945 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms