Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLCSP50747 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.24■□□□□ 0.99
HLCSP50747 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLCSP50747 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLCSP50747 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLCSP50747 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLCSP50747 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HLCSP50747 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.23■□□□□ 0.99
HLCSP50747 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.23■□□□□ 0.99
HLCSP50747 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HLCSP50747 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 AC131281.2-201ENST00000520478 145 ntBASIC21.23■□□□□ 0.99
HLCSP50747 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.23■□□□□ 0.99
HLCSP50747 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 C1orf229-201ENST00000623686 2258 ntBASIC21.23■□□□□ 0.99
HLCSP50747 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
HLCSP50747 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HLCSP50747 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.23■□□□□ 0.99
HLCSP50747 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HLCSP50747 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLCSP50747 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HLCSP50747 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLCSP50747 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLCSP50747 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HLCSP50747 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLCSP50747 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLCSP50747 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.22■□□□□ 0.99
HLCSP50747 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLCSP50747 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLCSP50747 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HLCSP50747 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLCSP50747 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLCSP50747 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.21■□□□□ 0.99
HLCSP50747 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.21■□□□□ 0.99
HLCSP50747 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HLCSP50747 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.21■□□□□ 0.99
HLCSP50747 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLCSP50747 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLCSP50747 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HLCSP50747 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
HLCSP50747 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
HLCSP50747 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLCSP50747 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLCSP50747 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLCSP50747 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HLCSP50747 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLCSP50747 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.19■□□□□ 0.98
HLCSP50747 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.19■□□□□ 0.98
HLCSP50747 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.19■□□□□ 0.98
HLCSP50747 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.19■□□□□ 0.98
HLCSP50747 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.19■□□□□ 0.98
HLCSP50747 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLCSP50747 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLCSP50747 GUSBP5-202ENST00000510805 1989 ntBASIC21.19■□□□□ 0.98
HLCSP50747 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HLCSP50747 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLCSP50747 AC131274.2-201ENST00000580697 1507 ntBASIC21.19■□□□□ 0.98
HLCSP50747 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLCSP50747 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.19■□□□□ 0.98
HLCSP50747 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
HLCSP50747 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLCSP50747 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HLCSP50747 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLCSP50747 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLCSP50747 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLCSP50747 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLCSP50747 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLCSP50747 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.18■□□□□ 0.98
HLCSP50747 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HLCSP50747 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HLCSP50747 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 AL136116.3-201ENST00000402907 1138 ntBASIC21.17■□□□□ 0.98
HLCSP50747 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.17■□□□□ 0.98
HLCSP50747 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.17■□□□□ 0.98
HLCSP50747 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.17■□□□□ 0.98
HLCSP50747 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.17■□□□□ 0.98
HLCSP50747 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HLCSP50747 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 ECEL1P1-201ENST00000373592 1742 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms