Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 UBP7YIL156W 3216 nt4.39□□□□□ -1.71
RPH1P39956 HFA1YMR207C 6372 nt4.39□□□□□ -1.71
RPH1P39956 ABD1YBR236C 1311 nt4.39□□□□□ -1.71
RPH1P39956 MNN1YER001W 2289 nt4.38□□□□□ -1.71
RPH1P39956 YBR139WYBR139W 1527 nt4.38□□□□□ -1.71
RPH1P39956 CDC15YAR019C 2925 nt4.38□□□□□ -1.71
RPH1P39956 BCP1YDR361C 852 nt4.38□□□□□ -1.71
RPH1P39956 YDR545C-AYDR545C-A 480 nt4.38□□□□□ -1.71
RPH1P39956 RIP1YEL024W 648 nt4.38□□□□□ -1.71
RPH1P39956 YEL077W-AYEL077W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YER190C-BYER190C-B 483 nt4.38□□□□□ -1.71
RPH1P39956 YFL068WYFL068W 483 nt4.38□□□□□ -1.71
RPH1P39956 RNA15YGL044C 891 nt4.38□□□□□ -1.71
RPH1P39956 Q0144Q0144 330 nt4.38□□□□□ -1.71
RPH1P39956 YGR296C-BYGR296C-B 483 nt4.38□□□□□ -1.71
RPH1P39956 YHL050W-AYHL050W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 MRPL6YHR147C 645 nt4.38□□□□□ -1.71
RPH1P39956 YHR219C-AYHR219C-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YIL177W-AYIL177W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YJL225W-AYJL225W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 ISA1YLL027W 753 nt4.38□□□□□ -1.71
RPH1P39956 YLL066W-AYLL066W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YLL067W-AYLL067W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 UBC12YLR306W 567 nt4.38□□□□□ -1.71
RPH1P39956 YLR466C-AYLR466C-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YLR467C-AYLR467C-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YML133W-BYML133W-B 483 nt4.38□□□□□ -1.71
RPH1P39956 YNL339W-BYNL339W-B 483 nt4.38□□□□□ -1.71
RPH1P39956 YBL113W-AYBL113W-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YOR396C-AYOR396C-A 483 nt4.38□□□□□ -1.71
RPH1P39956 YPL073CYPL073C 486 nt4.38□□□□□ -1.71
RPH1P39956 YPL283W-BYPL283W-B 483 nt4.38□□□□□ -1.71
RPH1P39956 YPR204C-AYPR204C-A 483 nt4.38□□□□□ -1.71
RPH1P39956 PRD1YCL057W 2139 nt4.38□□□□□ -1.71
RPH1P39956 YPK3YBR028C 1578 nt4.38□□□□□ -1.71
RPH1P39956 ATR1YML116W 1629 nt4.38□□□□□ -1.71
RPH1P39956 CDC48YDL126C 2508 nt4.38□□□□□ -1.71
RPH1P39956 YHR177WYHR177W 1362 nt4.38□□□□□ -1.71
RPH1P39956 TGL4YKR089C 2733 nt4.37□□□□□ -1.71
RPH1P39956 MET3YJR010W 1536 nt4.37□□□□□ -1.71
RPH1P39956 COQ4YDR204W 1008 nt4.37□□□□□ -1.71
RPH1P39956 YLR124WYLR124W 345 nt4.37□□□□□ -1.71
RPH1P39956 GTR1YML121W 933 nt4.37□□□□□ -1.71
RPH1P39956 YMR085WYMR085W 1299 nt4.37□□□□□ -1.71
RPH1P39956 YNG1YOR064C 660 nt4.37□□□□□ -1.71
RPH1P39956 BAG7YOR134W 1230 nt4.37□□□□□ -1.71
RPH1P39956 YPL077CYPL077C 723 nt4.37□□□□□ -1.71
RPH1P39956 ARC40YBR234C 1155 nt4.37□□□□□ -1.71
RPH1P39956 PEX34YCL056C 435 nt4.37□□□□□ -1.71
RPH1P39956 PMT5YDL093W 2232 nt4.37□□□□□ -1.71
RPH1P39956 FOX2YKR009C 2703 nt4.37□□□□□ -1.71
RPH1P39956 OKP1YGR179C 1221 nt4.36□□□□□ -1.71
RPH1P39956 YAL047W-AYAL047W-A 330 nt4.36□□□□□ -1.71
RPH1P39956 UIP3YAR027W 708 nt4.36□□□□□ -1.71
RPH1P39956 YOL038C-AYOL038C-A 96 nt4.36□□□□□ -1.71
RPH1P39956 GSM1YJL103C 1857 nt4.36□□□□□ -1.71
RPH1P39956 GSH2YOL049W 1476 nt4.36□□□□□ -1.71
RPH1P39956 TRS85YDR108W 2097 nt4.35□□□□□ -1.71
RPH1P39956 RXT3YDL076C 885 nt4.35□□□□□ -1.71
RPH1P39956 TAF10YDR167W 621 nt4.35□□□□□ -1.71
RPH1P39956 TRP4YDR354W 1143 nt4.35□□□□□ -1.71
RPH1P39956 YIL047C-AYIL047C-A 369 nt4.35□□□□□ -1.71
RPH1P39956 LSO1YJR005C-A 282 nt4.35□□□□□ -1.71
RPH1P39956 IMP2YMR035W 534 nt4.35□□□□□ -1.71
RPH1P39956 MRPS8YMR158W 468 nt4.35□□□□□ -1.71
RPH1P39956 ROT1YMR200W 771 nt4.35□□□□□ -1.71
RPH1P39956 GPI12YMR281W 915 nt4.35□□□□□ -1.71
RPH1P39956 MET16YPR167C 786 nt4.35□□□□□ -1.71
RPH1P39956 ORC6YHR118C 1308 nt4.35□□□□□ -1.71
RPH1P39956 PSY4YBL046W 1326 nt4.35□□□□□ -1.71
RPH1P39956 NNK1YKL171W 2787 nt4.35□□□□□ -1.71
RPH1P39956 TOG1YER184C 2385 nt4.34□□□□□ -1.71
RPH1P39956 STB2YMR053C 2553 nt4.34□□□□□ -1.71
RPH1P39956 YDL157CYDL157C 357 nt4.34□□□□□ -1.71
RPH1P39956 YDR222WYDR222W 1248 nt4.34□□□□□ -1.71
RPH1P39956 DSD1YGL196W 1287 nt4.34□□□□□ -1.71
RPH1P39956 NAT2YGR147C 867 nt4.34□□□□□ -1.71
RPH1P39956 YMR086C-AYMR086C-A 339 nt4.34□□□□□ -1.71
RPH1P39956 YIM2YMR151W 438 nt4.34□□□□□ -1.71
RPH1P39956 RER1YCL001W 567 nt4.34□□□□□ -1.71
RPH1P39956 SEN1YLR430W 6696 nt4.34□□□□□ -1.72
RPH1P39956 HIS4YCL030C 2400 nt4.33□□□□□ -1.72
RPH1P39956 MET12YPL023C 1974 nt4.33□□□□□ -1.72
RPH1P39956 PHO84YML123C 1764 nt4.33□□□□□ -1.72
RPH1P39956 YER158CYER158C 1722 nt4.33□□□□□ -1.72
RPH1P39956 TRM8YDL201W 861 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)CtK(CUU)C 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)D1tK(CUU)D1 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)D2tK(CUU)D2 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)E1tK(CUU)E1 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)E2tK(CUU)E2 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)FtK(CUU)F 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)G1tK(CUU)G1 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)G2tK(CUU)G2 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)G3tK(CUU)G3 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)ItK(CUU)I 73 nt4.33□□□□□ -1.72
RPH1P39956 YER138W-AYER138W-A 105 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)JtK(CUU)J 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)KtK(CUU)K 73 nt4.33□□□□□ -1.72
RPH1P39956 tK(CUU)MtK(CUU)M 73 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms