Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.88■■□□□ 1.25
COL4A2P08572 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.88■■□□□ 1.25
COL4A2P08572 RAP2CP1-201ENST00000605103 478 ntBASIC22.88■■□□□ 1.25
COL4A2P08572 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.88■■□□□ 1.25
COL4A2P08572 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL4A2P08572 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
COL4A2P08572 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.87■■□□□ 1.25
COL4A2P08572 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.87■■□□□ 1.25
COL4A2P08572 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.87■■□□□ 1.25
COL4A2P08572 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
COL4A2P08572 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.87■■□□□ 1.25
COL4A2P08572 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.87■■□□□ 1.25
COL4A2P08572 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL4A2P08572 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL4A2P08572 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.87■■□□□ 1.25
COL4A2P08572 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL4A2P08572 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.86■■□□□ 1.25
COL4A2P08572 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL4A2P08572 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL4A2P08572 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL4A2P08572 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL4A2P08572 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL4A2P08572 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL4A2P08572 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL4A2P08572 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL4A2P08572 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.85■■□□□ 1.25
COL4A2P08572 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.85■■□□□ 1.25
COL4A2P08572 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL4A2P08572 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.85■■□□□ 1.25
COL4A2P08572 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL4A2P08572 AP005435.1-201ENST00000529293 1178 ntBASIC22.85■■□□□ 1.25
COL4A2P08572 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.85■■□□□ 1.25
COL4A2P08572 DUX4L4-201ENST00000566884 1269 ntBASIC22.85■■□□□ 1.25
COL4A2P08572 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL4A2P08572 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.85■■□□□ 1.25
COL4A2P08572 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.85■■□□□ 1.25
COL4A2P08572 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.84■■□□□ 1.25
COL4A2P08572 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.84■■□□□ 1.25
COL4A2P08572 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL4A2P08572 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL4A2P08572 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.84■■□□□ 1.25
COL4A2P08572 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
COL4A2P08572 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.84■■□□□ 1.25
COL4A2P08572 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL4A2P08572 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.84■■□□□ 1.25
COL4A2P08572 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.84■■□□□ 1.25
COL4A2P08572 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL4A2P08572 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL4A2P08572 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL4A2P08572 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL4A2P08572 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.83■■□□□ 1.25
COL4A2P08572 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.83■■□□□ 1.25
COL4A2P08572 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.82■■□□□ 1.24
COL4A2P08572 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.82■■□□□ 1.24
COL4A2P08572 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.82■■□□□ 1.24
COL4A2P08572 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.82■■□□□ 1.24
COL4A2P08572 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.82■■□□□ 1.24
COL4A2P08572 FP325331.1-202ENST00000623531 1380 ntBASIC22.82■■□□□ 1.24
COL4A2P08572 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL4A2P08572 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL4A2P08572 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.82■■□□□ 1.24
COL4A2P08572 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL4A2P08572 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL4A2P08572 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL4A2P08572 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL4A2P08572 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL4A2P08572 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
COL4A2P08572 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
COL4A2P08572 HLA-L-209ENST00000420110 1011 ntBASIC22.81■■□□□ 1.24
COL4A2P08572 AC006015.1-201ENST00000429970 570 ntBASIC22.81■■□□□ 1.24
COL4A2P08572 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.81■■□□□ 1.24
COL4A2P08572 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.81■■□□□ 1.24
COL4A2P08572 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.81■■□□□ 1.24
COL4A2P08572 NTF6G-201ENST00000591094 616 ntBASIC22.81■■□□□ 1.24
COL4A2P08572 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
COL4A2P08572 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.8■■□□□ 1.24
COL4A2P08572 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.8■■□□□ 1.24
COL4A2P08572 AC144652.1-201ENST00000609974 1624 ntBASIC22.8■■□□□ 1.24
COL4A2P08572 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL4A2P08572 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.8■■□□□ 1.24
COL4A2P08572 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL4A2P08572 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.8■■□□□ 1.24
COL4A2P08572 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
COL4A2P08572 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL4A2P08572 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL4A2P08572 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL4A2P08572 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.79■■□□□ 1.24
COL4A2P08572 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.79■■□□□ 1.24
COL4A2P08572 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL4A2P08572 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.79■■□□□ 1.24
COL4A2P08572 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL4A2P08572 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms