Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETP07949 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.53■■□□□ 1.2
RETP07949 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETP07949 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RETP07949 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETP07949 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RETP07949 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.52■■□□□ 1.2
RETP07949 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.52■■□□□ 1.2
RETP07949 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.52■■□□□ 1.2
RETP07949 pRNA.6-201ENST00000610482 90 ntBASIC22.52■■□□□ 1.2
RETP07949 pRNA.5-201ENST00000612139 90 ntBASIC22.52■■□□□ 1.2
RETP07949 pRNA.11-201ENST00000618423 90 ntBASIC22.52■■□□□ 1.2
RETP07949 pRNA.13-201ENST00000619112 90 ntBASIC22.52■■□□□ 1.2
RETP07949 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETP07949 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RETP07949 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETP07949 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RETP07949 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
RETP07949 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.51■■□□□ 1.19
RETP07949 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.51■■□□□ 1.19
RETP07949 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.51■■□□□ 1.19
RETP07949 TERF1P2-201ENST00000583350 1212 ntBASIC22.51■■□□□ 1.19
RETP07949 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.51■■□□□ 1.19
RETP07949 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.51■■□□□ 1.19
RETP07949 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.51■■□□□ 1.19
RETP07949 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETP07949 LINC02228-203ENST00000641970 1355 ntBASIC22.5■■□□□ 1.19
RETP07949 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETP07949 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RETP07949 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETP07949 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.5■■□□□ 1.19
RETP07949 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RETP07949 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.49■■□□□ 1.19
RETP07949 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
RETP07949 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RETP07949 ESRRAP2-201ENST00000418437 1549 ntBASIC22.49■■□□□ 1.19
RETP07949 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 AC080038.1-201ENST00000611274 1154 ntBASIC22.49■■□□□ 1.19
RETP07949 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETP07949 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.48■■□□□ 1.19
RETP07949 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.48■■□□□ 1.19
RETP07949 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETP07949 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETP07949 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.48■■□□□ 1.19
RETP07949 ABHD17AP1-201ENST00000358206 933 ntBASIC22.48■■□□□ 1.19
RETP07949 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
RETP07949 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RETP07949 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RETP07949 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.48■■□□□ 1.19
RETP07949 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.47■■□□□ 1.19
RETP07949 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.47■■□□□ 1.19
RETP07949 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.47■■□□□ 1.19
RETP07949 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.47■■□□□ 1.19
RETP07949 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.47■■□□□ 1.19
RETP07949 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.47■■□□□ 1.19
RETP07949 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RETP07949 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.47■■□□□ 1.19
RETP07949 AP003733.4-201ENST00000623785 1697 ntBASIC22.46■■□□□ 1.19
RETP07949 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RETP07949 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RETP07949 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.46■■□□□ 1.19
RETP07949 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RETP07949 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETP07949 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
RETP07949 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
RETP07949 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RETP07949 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RETP07949 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RETP07949 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RETP07949 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms