Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SCAF4O95104 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.16■□□□□ 0.5
SCAF4O95104 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SCAF4O95104 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCAF4O95104 AC004987.1-201ENST00000428627 508 ntBASIC18.16■□□□□ 0.5
SCAF4O95104 SPCS2P3-201ENST00000500401 656 ntBASIC18.16■□□□□ 0.5
SCAF4O95104 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAF4O95104 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.16■□□□□ 0.5
SCAF4O95104 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCAF4O95104 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SCAF4O95104 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCAF4O95104 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SCAF4O95104 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCAF4O95104 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SCAF4O95104 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCAF4O95104 ATP5G2P3-201ENST00000429083 425 ntBASIC18.15■□□□□ 0.5
SCAF4O95104 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCAF4O95104 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.15■□□□□ 0.5
SCAF4O95104 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCAF4O95104 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCAF4O95104 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
SCAF4O95104 AC090877.2-201ENST00000558441 1738 ntBASIC18.15■□□□□ 0.5
SCAF4O95104 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
SCAF4O95104 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.14■□□□□ 0.49
SCAF4O95104 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCAF4O95104 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCAF4O95104 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCAF4O95104 TSPY13P-201ENST00000338964 914 ntBASIC18.14■□□□□ 0.49
SCAF4O95104 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SCAF4O95104 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.14■□□□□ 0.49
SCAF4O95104 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SCAF4O95104 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCAF4O95104 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SCAF4O95104 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCAF4O95104 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.13■□□□□ 0.49
SCAF4O95104 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.13■□□□□ 0.49
SCAF4O95104 AL137060.1-201ENST00000618151 2648 ntBASIC18.13■□□□□ 0.49
SCAF4O95104 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.13■□□□□ 0.49
SCAF4O95104 MIR6765-201ENST00000614092 87 ntBASIC18.13■□□□□ 0.49
SCAF4O95104 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCAF4O95104 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.13■□□□□ 0.49
SCAF4O95104 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCAF4O95104 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.12■□□□□ 0.49
SCAF4O95104 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.12■□□□□ 0.49
SCAF4O95104 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SCAF4O95104 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.12■□□□□ 0.49
SCAF4O95104 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.12■□□□□ 0.49
SCAF4O95104 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCAF4O95104 AC242852.2-201ENST00000615738 1807 ntBASIC18.12■□□□□ 0.49
SCAF4O95104 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SCAF4O95104 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SCAF4O95104 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SCAF4O95104 AL022069.1-201ENST00000568025 1636 ntBASIC18.11■□□□□ 0.49
SCAF4O95104 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SCAF4O95104 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCAF4O95104 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SCAF4O95104 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.1■□□□□ 0.49
SCAF4O95104 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCAF4O95104 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SCAF4O95104 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 BHLHE23-202ENST00000612929 1109 ntBASIC18.1■□□□□ 0.49
SCAF4O95104 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.1■□□□□ 0.49
SCAF4O95104 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAF4O95104 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCAF4O95104 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SCAF4O95104 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.09■□□□□ 0.49
SCAF4O95104 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms