Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALX3O95076 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX3O95076 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.61■□□□□ 0.73
ALX3O95076 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX3O95076 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALX3O95076 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALX3O95076 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ALX3O95076 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ALX3O95076 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ALX3O95076 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
ALX3O95076 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ALX3O95076 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.6■□□□□ 0.73
ALX3O95076 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALX3O95076 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 AF106564.1-201ENST00000607058 2553 ntBASIC19.59■□□□□ 0.73
ALX3O95076 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ALX3O95076 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 AC131274.2-201ENST00000580697 1507 ntBASIC19.59■□□□□ 0.73
ALX3O95076 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALX3O95076 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
ALX3O95076 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALX3O95076 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALX3O95076 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.73
ALX3O95076 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALX3O95076 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALX3O95076 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALX3O95076 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALX3O95076 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALX3O95076 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.58■□□□□ 0.72
ALX3O95076 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ALX3O95076 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
ALX3O95076 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.58■□□□□ 0.72
ALX3O95076 ALDH1A3-203ENST00000557963 1670 ntBASIC19.58■□□□□ 0.72
ALX3O95076 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ALX3O95076 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.58■□□□□ 0.72
ALX3O95076 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.58■□□□□ 0.72
ALX3O95076 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALX3O95076 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.57■□□□□ 0.72
ALX3O95076 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX3O95076 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.57■□□□□ 0.72
ALX3O95076 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX3O95076 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.57■□□□□ 0.72
ALX3O95076 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX3O95076 NTF6A-201ENST00000591175 560 ntBASIC19.57■□□□□ 0.72
ALX3O95076 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX3O95076 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALX3O95076 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALX3O95076 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
ALX3O95076 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.56■□□□□ 0.72
ALX3O95076 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.56■□□□□ 0.72
ALX3O95076 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALX3O95076 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.55■□□□□ 0.72
ALX3O95076 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ALX3O95076 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.55■□□□□ 0.72
ALX3O95076 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.55■□□□□ 0.72
ALX3O95076 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ALX3O95076 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.55■□□□□ 0.72
ALX3O95076 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.55■□□□□ 0.72
ALX3O95076 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ALX3O95076 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 PKD1P6-201ENST00000343738 4769 ntBASIC19.55■□□□□ 0.72
ALX3O95076 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALX3O95076 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ALX3O95076 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ALX3O95076 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ALX3O95076 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ALX3O95076 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.54■□□□□ 0.72
ALX3O95076 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALX3O95076 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALX3O95076 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALX3O95076 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
ALX3O95076 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms