Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RRP8O43159 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.08■□□□□ 0.97
RRP8O43159 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.08■□□□□ 0.97
RRP8O43159 AC105233.4-201ENST00000642045 216 ntBASIC21.08■□□□□ 0.97
RRP8O43159 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RRP8O43159 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.08■□□□□ 0.96
RRP8O43159 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.07■□□□□ 0.96
RRP8O43159 CD99P1-205ENST00000527459 561 ntBASIC21.07■□□□□ 0.96
RRP8O43159 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.07■□□□□ 0.96
RRP8O43159 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.07■□□□□ 0.96
RRP8O43159 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.07■□□□□ 0.96
RRP8O43159 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.07■□□□□ 0.96
RRP8O43159 AC066615.1-201ENST00000640911 628 ntBASIC21.07■□□□□ 0.96
RRP8O43159 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RRP8O43159 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.07■□□□□ 0.96
RRP8O43159 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RRP8O43159 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.06■□□□□ 0.96
RRP8O43159 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.06■□□□□ 0.96
RRP8O43159 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RRP8O43159 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.06■□□□□ 0.96
RRP8O43159 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.06■□□□□ 0.96
RRP8O43159 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.06■□□□□ 0.96
RRP8O43159 AC010501.1-201ENST00000606270 1962 ntBASIC21.06■□□□□ 0.96
RRP8O43159 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.06■□□□□ 0.96
RRP8O43159 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RRP8O43159 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RRP8O43159 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.05■□□□□ 0.96
RRP8O43159 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.05■□□□□ 0.96
RRP8O43159 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RRP8O43159 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RRP8O43159 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.05■□□□□ 0.96
RRP8O43159 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RRP8O43159 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.05■□□□□ 0.96
RRP8O43159 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RRP8O43159 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RRP8O43159 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RRP8O43159 AC145676.1-201ENST00000514988 2004 ntBASIC21.05■□□□□ 0.96
RRP8O43159 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RRP8O43159 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RRP8O43159 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.05■□□□□ 0.96
RRP8O43159 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RRP8O43159 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.04■□□□□ 0.96
RRP8O43159 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RRP8O43159 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.04■□□□□ 0.96
RRP8O43159 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.04■□□□□ 0.96
RRP8O43159 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RRP8O43159 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.04■□□□□ 0.96
RRP8O43159 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RRP8O43159 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RRP8O43159 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
RRP8O43159 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RRP8O43159 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RRP8O43159 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RRP8O43159 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RRP8O43159 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.03■□□□□ 0.96
RRP8O43159 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RRP8O43159 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.03■□□□□ 0.96
RRP8O43159 AP005435.1-201ENST00000529293 1178 ntBASIC21.03■□□□□ 0.96
RRP8O43159 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.03■□□□□ 0.96
RRP8O43159 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RRP8O43159 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RRP8O43159 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.03■□□□□ 0.96
RRP8O43159 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.03■□□□□ 0.96
RRP8O43159 AL161729.1-201ENST00000604104 1402 ntBASIC21.03■□□□□ 0.96
RRP8O43159 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RRP8O43159 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.03■□□□□ 0.96
RRP8O43159 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.02■□□□□ 0.96
RRP8O43159 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.02■□□□□ 0.96
RRP8O43159 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.02■□□□□ 0.96
RRP8O43159 NCF1B-203ENST00000435988 1254 ntBASIC21.02■□□□□ 0.96
RRP8O43159 OR2I1P-207ENST00000453522 948 ntBASIC21.02■□□□□ 0.96
RRP8O43159 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.02■□□□□ 0.96
RRP8O43159 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RRP8O43159 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RRP8O43159 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RRP8O43159 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.02■□□□□ 0.96
RRP8O43159 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RRP8O43159 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RRP8O43159 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RRP8O43159 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.01■□□□□ 0.95
RRP8O43159 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.01■□□□□ 0.95
RRP8O43159 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.01■□□□□ 0.95
RRP8O43159 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.01■□□□□ 0.95
RRP8O43159 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.01■□□□□ 0.95
RRP8O43159 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.01■□□□□ 0.95
RRP8O43159 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.01■□□□□ 0.95
RRP8O43159 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RRP8O43159 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RRP8O43159 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RRP8O43159 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RRP8O43159 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RRP8O43159 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RRP8O43159 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RRP8O43159 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms