Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AP001330.3-201ENST00000520123 633 ntBASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SUDS3P1-201ENST00000505831 966 ntBASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV11-1A0A0K0K1C0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC133637.1-201ENST00000624115 1537 ntBASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC008764.7-201ENST00000593779 1081 ntBASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AL499627.2-201ENST00000606283 725 ntBASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MIR939-201ENST00000401314 82 ntBASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV11-1A0A0K0K1C0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.64■□□□□ 0.9
TRBV11-1A0A0K0K1C0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TRBV11-1A0A0K0K1C0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRBV11-1A0A0K0K1C0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AL136967.2-201ENST00000623968 743 ntBASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AL353803.4-201ENST00000565882 1934 ntBASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AC027682.1-201ENST00000562846 899 ntBASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 ANOS2P-203ENST00000472227 1816 ntBASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AC091305.1-201ENST00000479476 895 ntBASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms