Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC027281.2-201ENST00000623856 713 ntBASIC13.66□□□□□ -0.22
SOX11P35716 AC015967.2-201ENST00000624092 234 ntBASIC13.66□□□□□ -0.22
SOX11P35716 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC13.66□□□□□ -0.22
SOX11P35716 AC006435.4-201ENST00000625037 234 ntBASIC13.66□□□□□ -0.22
SOX11P35716 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.66□□□□□ -0.22
SOX11P35716 AL356737.1-201ENST00000634391 234 ntBASIC13.66□□□□□ -0.22
SOX11P35716 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 AC008132.1-202ENST00000342005 1389 ntBASIC13.66□□□□□ -0.22
SOX11P35716 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SOX11P35716 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 KRT8P19-201ENST00000551916 1455 ntBASIC13.66□□□□□ -0.22
SOX11P35716 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.66□□□□□ -0.22
SOX11P35716 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 AL031719.1-201ENST00000623365 2587 ntBASIC13.66□□□□□ -0.22
SOX11P35716 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SOX11P35716 ACTG1P2-201ENST00000415776 1125 ntBASIC13.65□□□□□ -0.22
SOX11P35716 ACTG1P11-201ENST00000425411 1125 ntBASIC13.65□□□□□ -0.22
SOX11P35716 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 AL161932.2-201ENST00000435436 679 ntBASIC13.65□□□□□ -0.22
SOX11P35716 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.65□□□□□ -0.22
SOX11P35716 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.65□□□□□ -0.22
SOX11P35716 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 AC245884.6-201ENST00000515672 1067 ntBASIC13.65□□□□□ -0.22
SOX11P35716 AC024681.1-201ENST00000521917 487 ntBASIC13.65□□□□□ -0.22
SOX11P35716 AL160314.3-201ENST00000556041 767 ntBASIC13.65□□□□□ -0.22
SOX11P35716 AC005586.2-201ENST00000563946 837 ntBASIC13.65□□□□□ -0.22
SOX11P35716 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.65□□□□□ -0.22
SOX11P35716 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 AL132994.2-201ENST00000603120 687 ntBASIC13.65□□□□□ -0.22
SOX11P35716 BAP1-211ENST00000615113 489 ntBASIC13.65□□□□□ -0.22
SOX11P35716 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 Z98259.2-201ENST00000641583 609 ntBASIC13.65□□□□□ -0.22
SOX11P35716 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SOX11P35716 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX11P35716 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SOX11P35716 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX11P35716 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
SOX11P35716 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.65□□□□□ -0.23
SOX11P35716 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 AL008718.2-201ENST00000609206 1313 ntBASIC13.64□□□□□ -0.23
SOX11P35716 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SOX11P35716 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX11P35716 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX11P35716 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SOX11P35716 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
SOX11P35716 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.64□□□□□ -0.23
SOX11P35716 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX11P35716 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX11P35716 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX11P35716 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX11P35716 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms