Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 ANKRD20A7P-201ENST00000402318 2414 ntBASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 RBM22P2-201ENST00000393978 1814 ntBASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGB1P1B2RPK0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 AC098850.1-201ENST00000419919 790 ntBASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 FAM86GP-201ENST00000448322 971 ntBASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 ECM1P1-201ENST00000604092 1279 ntBASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 AC010536.1-201ENST00000538868 2611 ntBASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGB1P1B2RPK0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC080013.1-204ENST00000607426 2185 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 UPF3AP3-201ENST00000420996 769 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC012441.1-201ENST00000446669 685 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC132192.2-201ENST00000596206 1147 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MIR6720-201ENST00000611664 98 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AL390754.1-201ENST00000619088 582 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC132938.4-201ENST00000623835 848 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 AC007614.5-201ENST00000623424 8892 ntBASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGB1P1B2RPK0 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms