Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ERP29P1-201ENST00000442902 706 ntBASIC14.76□□□□□ -0.05
O00370 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.76□□□□□ -0.05
O00370 AC007279.1-201ENST00000448547 837 ntBASIC14.76□□□□□ -0.05
O00370 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.76□□□□□ -0.05
O00370 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.76□□□□□ -0.05
O00370 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
O00370 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 RN7SL81P-201ENST00000493781 261 ntBASIC14.76□□□□□ -0.05
O00370 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.76□□□□□ -0.05
O00370 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
O00370 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.76□□□□□ -0.05
O00370 AC138701.2-201ENST00000553634 226 ntBASIC14.76□□□□□ -0.05
O00370 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.76□□□□□ -0.05
O00370 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.76□□□□□ -0.05
O00370 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 AL049840.2-201ENST00000602722 535 ntBASIC14.76□□□□□ -0.05
O00370 AC138894.2-201ENST00000602838 371 ntBASIC14.76□□□□□ -0.05
O00370 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.76□□□□□ -0.05
O00370 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.76□□□□□ -0.05
O00370 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.76□□□□□ -0.05
O00370 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
O00370 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
O00370 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
O00370 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.76□□□□□ -0.05
O00370 AF013593.1-201ENST00000458074 1487 ntBASIC14.76□□□□□ -0.05
O00370 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
O00370 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.75□□□□□ -0.05
O00370 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.75□□□□□ -0.05
O00370 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.75□□□□□ -0.05
O00370 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
O00370 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.75□□□□□ -0.05
O00370 ODCP-201ENST00000459650 1639 ntBASIC14.75□□□□□ -0.05
O00370 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.75□□□□□ -0.05
O00370 AC020763.3-201ENST00000625095 2904 ntBASIC14.75□□□□□ -0.05
O00370 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
O00370 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
O00370 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.75□□□□□ -0.05
O00370 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.75□□□□□ -0.05
O00370 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.75□□□□□ -0.05
O00370 EEF1DP6-201ENST00000449232 372 ntBASIC14.75□□□□□ -0.05
O00370 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.75□□□□□ -0.05
O00370 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
O00370 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.75□□□□□ -0.05
O00370 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.75□□□□□ -0.05
O00370 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.75□□□□□ -0.05
O00370 AL356740.1-201ENST00000602192 1297 ntBASIC14.75□□□□□ -0.05
O00370 AC103810.10-201ENST00000606504 343 ntBASIC14.75□□□□□ -0.05
O00370 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.75□□□□□ -0.05
O00370 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.75□□□□□ -0.05
O00370 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
O00370 AC009474.1-201ENST00000455096 1565 ntBASIC14.75□□□□□ -0.05
O00370 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.75□□□□□ -0.05
O00370 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
O00370 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
O00370 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.75□□□□□ -0.05
O00370 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
O00370 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.74□□□□□ -0.05
O00370 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
O00370 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.74□□□□□ -0.05
O00370 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.74□□□□□ -0.05
O00370 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.74□□□□□ -0.05
O00370 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
O00370 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.74□□□□□ -0.05
O00370 AL512430.1-201ENST00000392575 860 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms