Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 HSD3BP1-201ENST00000286193 1111 ntBASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC027612.2-202ENST00000445955 1199 ntBASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AK2-208ENST00000487289 920 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AP000920.1-201ENST00000531824 344 ntBASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 RN7SL134P-201ENST00000579756 303 ntBASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC006116.2-201ENST00000589958 988 ntBASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 PRMT1P1-201ENST00000604252 1009 ntBASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM1Q2M3G4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 AP000437.1-201ENST00000624057 2085 ntBASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 AC012531.1-201ENST00000562848 2680 ntBASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 DUT-207ENST00000559416 635 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 AL590235.1-201ENST00000564650 861 ntBASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 ENPP7P8-202ENST00000527856 1345 ntBASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM1Q2M3G4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AC011474.4-201ENST00000623523 2076 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AC126755.1-201ENST00000525846 6405 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms