Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.49□□□□□ -0.41
SUMO3P55854 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 FGFR3P1-201ENST00000449999 601 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.49□□□□□ -0.41
SUMO3P55854 IGHV1-12-201ENST00000518307 205 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.49□□□□□ -0.41
SUMO3P55854 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.49□□□□□ -0.41
SUMO3P55854 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.49□□□□□ -0.41
SUMO3P55854 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.48□□□□□ -0.41
SUMO3P55854 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.48□□□□□ -0.41
SUMO3P55854 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.48□□□□□ -0.41
SUMO3P55854 AP000911.2-201ENST00000534330 502 ntBASIC12.48□□□□□ -0.41
SUMO3P55854 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SUMO3P55854 RHOQP1-201ENST00000555758 579 ntBASIC12.48□□□□□ -0.41
SUMO3P55854 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.48□□□□□ -0.41
SUMO3P55854 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.48□□□□□ -0.41
SUMO3P55854 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.48□□□□□ -0.41
SUMO3P55854 MIR8071-1-201ENST00000616769 65 ntBASIC12.48□□□□□ -0.41
SUMO3P55854 MIR8071-2-201ENST00000616772 65 ntBASIC12.48□□□□□ -0.41
SUMO3P55854 AC025262.2-201ENST00000623975 1056 ntBASIC12.48□□□□□ -0.41
SUMO3P55854 AL805961.1-201ENST00000642026 753 ntBASIC12.48□□□□□ -0.41
SUMO3P55854 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
SUMO3P55854 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.48□□□□□ -0.41
SUMO3P55854 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SUMO3P55854 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.47□□□□□ -0.41
SUMO3P55854 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 AC090502.4-201ENST00000551714 1386 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 339.4 ms