Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SERBP1P2-201ENST00000436888 1164 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 HLA-W-207ENST00000439514 771 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.16■□□□□ 0.02
CPT1AP50416 SNORA47-201ENST00000458862 138 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 RN7SL684P-201ENST00000465665 294 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.16■□□□□ 0.02
CPT1AP50416 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.16■□□□□ 0.02
CPT1AP50416 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPT1AP50416 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 KRT18P8-201ENST00000581937 1246 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 AC123912.6-201ENST00000612657 315 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CPT1AP50416 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPT1AP50416 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
CPT1AP50416 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPT1AP50416 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CPT1AP50416 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.16■□□□□ 0.02
CPT1AP50416 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPT1AP50416 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.15■□□□□ 0.02
CPT1AP50416 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.15■□□□□ 0.02
CPT1AP50416 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC15.15■□□□□ 0.02
CPT1AP50416 MTHFD2P7-201ENST00000483867 983 ntBASIC15.15■□□□□ 0.02
CPT1AP50416 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.15■□□□□ 0.02
CPT1AP50416 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC15.15■□□□□ 0.02
CPT1AP50416 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.15■□□□□ 0.02
CPT1AP50416 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC15.15■□□□□ 0.02
CPT1AP50416 AC016582.2-202ENST00000587765 1094 ntBASIC15.15■□□□□ 0.02
CPT1AP50416 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.15■□□□□ 0.02
CPT1AP50416 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC15.15■□□□□ 0.02
CPT1AP50416 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.15■□□□□ 0.02
CPT1AP50416 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.15■□□□□ 0.02
CPT1AP50416 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.15■□□□□ 0.02
CPT1AP50416 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
CPT1AP50416 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPT1AP50416 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPT1AP50416 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPT1AP50416 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPT1AP50416 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.14■□□□□ 0.01
CPT1AP50416 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CPT1AP50416 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.14■□□□□ 0.01
CPT1AP50416 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPT1AP50416 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CPT1AP50416 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPT1AP50416 SNORA50D-201ENST00000408059 134 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.14■□□□□ 0.01
CPT1AP50416 AL773545.2-201ENST00000442149 472 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.14■□□□□ 0.01
CPT1AP50416 AC004923.3-201ENST00000527532 355 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 PIGCP1-201ENST00000527583 895 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CPT1AP50416 PRR20FP-201ENST00000603320 180 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 SNORA50D-202ENST00000627561 132 ntBASIC15.14■□□□□ 0.01
CPT1AP50416 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CPT1AP50416 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPT1AP50416 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms