Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 TBC1D3J-201ENST00000620719 1426 ntBASIC16.82■□□□□ 0.28
MYCNP04198 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 GLS-203ENST00000409215 632 ntTSL 4 BASIC16.82■□□□□ 0.28
MYCNP04198 AL355334.1-201ENST00000417713 215 ntBASIC16.82■□□□□ 0.28
MYCNP04198 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC16.82■□□□□ 0.28
MYCNP04198 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.82■□□□□ 0.28
MYCNP04198 AC114501.1-201ENST00000445949 172 ntBASIC16.82■□□□□ 0.28
MYCNP04198 AL009048.1-201ENST00000450437 298 ntBASIC16.82■□□□□ 0.28
MYCNP04198 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 RN7SL8P-201ENST00000461771 266 ntBASIC16.82■□□□□ 0.28
MYCNP04198 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC16.82■□□□□ 0.28
MYCNP04198 SOX5P1-201ENST00000524155 1127 ntBASIC16.82■□□□□ 0.28
MYCNP04198 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC16.82■□□□□ 0.28
MYCNP04198 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 AGGF1P6-201ENST00000569213 976 ntBASIC16.82■□□□□ 0.28
MYCNP04198 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 MIR4783-201ENST00000580343 82 ntBASIC16.82■□□□□ 0.28
MYCNP04198 NBR2-204ENST00000587322 63 ntBASIC16.82■□□□□ 0.28
MYCNP04198 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.82■□□□□ 0.28
MYCNP04198 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 AL162233.1-201ENST00000620014 944 ntBASIC16.82■□□□□ 0.28
MYCNP04198 AC123767.1-202ENST00000620407 817 ntBASIC16.82■□□□□ 0.28
MYCNP04198 AC011491.1-203ENST00000637688 543 ntBASIC16.82■□□□□ 0.28
MYCNP04198 HLA-C-210ENST00000640219 976 ntBASIC16.82■□□□□ 0.28
MYCNP04198 AL805961.1-201ENST00000642026 753 ntBASIC16.82■□□□□ 0.28
MYCNP04198 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 AC009090.5-201ENST00000624886 2285 ntBASIC16.82■□□□□ 0.28
MYCNP04198 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.82■□□□□ 0.28
MYCNP04198 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 OR2I1P-209ENST00000641730 5365 ntBASIC16.82■□□□□ 0.28
MYCNP04198 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.82■□□□□ 0.28
MYCNP04198 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.82■□□□□ 0.28
MYCNP04198 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 AP001020.3-201ENST00000583314 1714 ntBASIC16.82■□□□□ 0.28
MYCNP04198 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MYCNP04198 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.81■□□□□ 0.28
MYCNP04198 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MYCNP04198 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 NDUFB5-201ENST00000259037 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.81■□□□□ 0.28
MYCNP04198 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 AL157884.3-201ENST00000448273 1184 ntBASIC16.81■□□□□ 0.28
MYCNP04198 RN7SL181P-201ENST00000462921 277 ntBASIC16.81■□□□□ 0.28
MYCNP04198 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC16.81■□□□□ 0.28
MYCNP04198 AC004590.1-201ENST00000502435 510 ntTSL 2 BASIC16.81■□□□□ 0.28
MYCNP04198 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 AC011595.2-201ENST00000546640 1110 ntBASIC16.81■□□□□ 0.28
MYCNP04198 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC16.81■□□□□ 0.28
MYCNP04198 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC16.81■□□□□ 0.28
MYCNP04198 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MYCNP04198 AC005324.6-201ENST00000587972 613 ntBASIC16.81■□□□□ 0.28
MYCNP04198 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.81■□□□□ 0.28
MYCNP04198 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms