Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HPS1Q92902 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.94□□□□□ -0.34
HPS1Q92902 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 AC017099.1-201ENST00000448261 1028 ntBASIC12.94□□□□□ -0.34
HPS1Q92902 AC114812.1-204ENST00000449669 728 ntBASIC12.94□□□□□ -0.34
HPS1Q92902 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.94□□□□□ -0.34
HPS1Q92902 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.94□□□□□ -0.34
HPS1Q92902 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.94□□□□□ -0.34
HPS1Q92902 AC017076.1-201ENST00000607613 578 ntBASIC12.94□□□□□ -0.34
HPS1Q92902 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.94□□□□□ -0.34
HPS1Q92902 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.94□□□□□ -0.34
HPS1Q92902 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HPS1Q92902 AL805961.2-201ENST00000642139 4817 ntBASIC12.94□□□□□ -0.34
HPS1Q92902 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HPS1Q92902 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 PFN1P12-201ENST00000455938 534 ntBASIC12.93□□□□□ -0.34
HPS1Q92902 FTH1P14-201ENST00000482930 551 ntBASIC12.93□□□□□ -0.34
HPS1Q92902 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.93□□□□□ -0.34
HPS1Q92902 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.93□□□□□ -0.34
HPS1Q92902 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 AL158050.2-201ENST00000605336 568 ntBASIC12.93□□□□□ -0.34
HPS1Q92902 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 AL603764.1-201ENST00000636452 321 ntBASIC12.93□□□□□ -0.34
HPS1Q92902 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 AL157996.1-201ENST00000624684 2299 ntBASIC12.93□□□□□ -0.34
HPS1Q92902 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HPS1Q92902 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.93□□□□□ -0.34
HPS1Q92902 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms