Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 KRT19P4-201ENST00000443208 943 ntBASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 RPSAP16-201ENST00000447583 821 ntBASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC147876.1-201ENST00000504408 322 ntBASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC092535.4-201ENST00000609548 397 ntBASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC011462.4-201ENST00000616866 449 ntBASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 AC020922.4-201ENST00000621389 339 ntBASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 AHCYP7-201ENST00000560847 1308 ntBASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 MKRN5P-201ENST00000445263 1467 ntBASIC17.08■□□□□ 0.32
KDM3BQ7LBC6 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 HNRNPA1P55-201ENST00000505935 955 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 GOLGA2P10-201ENST00000550961 817 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 KRT18P44-201ENST00000416086 1285 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AP000346.2-202ENST00000425948 383 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 GAPDHP29-201ENST00000429913 985 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 RN7SL578P-201ENST00000477781 283 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 MIR4254-201ENST00000581063 76 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC006986.1-201ENST00000612764 241 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 AC139100.2-201ENST00000616901 662 ntBASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KDM3BQ7LBC6 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 AC005549.1-201ENST00000579438 1629 ntBASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 AC024475.2-201ENST00000312173 879 ntBASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 SNORA30.1-201ENST00000363193 129 ntBASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM3BQ7LBC6 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 355 ms