Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.69□□□□□ -0.54
CD74P04233 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 AC144522.1-201ENST00000625111 1658 ntBASIC11.68□□□□□ -0.54
CD74P04233 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 GUCY2EP-203ENST00000531117 1918 ntBASIC11.68□□□□□ -0.54
CD74P04233 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.68□□□□□ -0.54
CD74P04233 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.68□□□□□ -0.54
CD74P04233 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.68□□□□□ -0.54
CD74P04233 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 OR2R1P-201ENST00000441404 914 ntBASIC11.68□□□□□ -0.54
CD74P04233 AL355864.2-201ENST00000447420 863 ntBASIC11.68□□□□□ -0.54
CD74P04233 CHCHD2P2-201ENST00000503744 321 ntBASIC11.68□□□□□ -0.54
CD74P04233 AC008494.3-201ENST00000606615 944 ntBASIC11.68□□□□□ -0.54
CD74P04233 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 AC133540.1-201ENST00000620845 1019 ntBASIC11.68□□□□□ -0.54
CD74P04233 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.68□□□□□ -0.54
CD74P04233 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 AC138028.6-201ENST00000616106 1482 ntBASIC11.68□□□□□ -0.54
CD74P04233 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.68□□□□□ -0.54
CD74P04233 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD74P04233 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.68□□□□□ -0.54
CD74P04233 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CD74P04233 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.67□□□□□ -0.54
CD74P04233 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CD74P04233 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.67□□□□□ -0.54
CD74P04233 CYP4F23P-201ENST00000593402 1579 ntBASIC11.67□□□□□ -0.54
CD74P04233 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CD74P04233 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
CD74P04233 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CD74P04233 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CD74P04233 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CD74P04233 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CD74P04233 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.67□□□□□ -0.54
CD74P04233 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CD74P04233 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.67□□□□□ -0.54
CD74P04233 FAM197Y7-201ENST00000432892 766 ntBASIC11.67□□□□□ -0.54
CD74P04233 C2orf27AP3-201ENST00000434123 579 ntBASIC11.67□□□□□ -0.54
CD74P04233 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.67□□□□□ -0.54
CD74P04233 AC006122.1-201ENST00000493323 440 ntBASIC11.67□□□□□ -0.54
CD74P04233 API5-211ENST00000534695 560 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms