Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 BTBD6P1-201ENST00000412176 1267 ntBASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AL139158.3-201ENST00000641212 1562 ntBASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AL591846.1-201ENST00000451736 433 ntBASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AC243960.2-201ENST00000600996 747 ntBASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 AHCYP4-201ENST00000419201 1315 ntBASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AMBRA1Q9C0C7 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms