Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 AF013593.1-201ENST00000458074 1487 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.15□□□□□ -0.14
NFKB1P19838 AC098934.1-203ENST00000442868 1262 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 DUTP3-201ENST00000450025 415 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.15□□□□□ -0.14
NFKB1P19838 RTN3P1-201ENST00000536295 711 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 AC007326.1-201ENST00000604539 458 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.15□□□□□ -0.14
NFKB1P19838 AL031673.1-201ENST00000611460 466 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 MIR6787-201ENST00000616675 61 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NFKB1P19838 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.15□□□□□ -0.14
NFKB1P19838 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NFKB1P19838 AC245140.2-201ENST00000624054 1939 ntBASIC14.15□□□□□ -0.14
NFKB1P19838 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NFKB1P19838 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NFKB1P19838 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NFKB1P19838 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NFKB1P19838 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NFKB1P19838 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 CAP2P1-201ENST00000557743 1390 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 LINC00265-2P-201ENST00000413372 782 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 AL353637.1-201ENST00000451571 732 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.14□□□□□ -0.15
NFKB1P19838 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 RPL18AP8-201ENST00000486071 528 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.14□□□□□ -0.15
NFKB1P19838 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.14□□□□□ -0.15
NFKB1P19838 AC242376.1-201ENST00000559033 726 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.14□□□□□ -0.15
NFKB1P19838 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.14□□□□□ -0.15
NFKB1P19838 AC132825.4-202ENST00000578792 434 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 RN7SL574P-201ENST00000581512 297 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
NFKB1P19838 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 AF254983.2-201ENST00000612331 135 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.14□□□□□ -0.15
NFKB1P19838 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 AL137784.3-201ENST00000623858 2288 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.14□□□□□ -0.15
NFKB1P19838 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 AC040160.2-201ENST00000623816 1675 ntBASIC14.14□□□□□ -0.15
NFKB1P19838 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NFKB1P19838 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NFKB1P19838 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
NFKB1P19838 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.13□□□□□ -0.15
NFKB1P19838 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.13□□□□□ -0.15
NFKB1P19838 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms