Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 CICP9-201ENST00000444451 1913 ntBASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 LINC02228-202ENST00000641261 2489 ntBASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 C2-209ENST00000452323 1999 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC011700.1-201ENST00000610409 2627 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC020907.1-201ENST00000616460 1350 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC140658.4-201ENST00000561990 352 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 RN7SL455P-201ENST00000580629 282 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 MIR6775-201ENST00000617557 69 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 MIR6869-201ENST00000619434 62 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC008687.7-202ENST00000637404 953 ntBASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHAMP1Q96JM3 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 BNIP3P42-201ENST00000454982 569 ntBASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 BNIP3P29-201ENST00000598302 571 ntBASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 AC011447.5-201ENST00000616168 564 ntBASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC16.15■□□□□ 0.18
CHAMP1Q96JM3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms