Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AP3S1Q92572 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 TUBB2BP1-201ENST00000404155 871 ntBASIC12.3□□□□□ -0.44
AP3S1Q92572 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S1Q92572 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AL391280.1-201ENST00000506969 1062 ntBASIC12.3□□□□□ -0.44
AP3S1Q92572 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S1Q92572 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.3□□□□□ -0.44
AP3S1Q92572 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S1Q92572 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.3□□□□□ -0.44
AP3S1Q92572 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S1Q92572 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AC008825.2-201ENST00000603374 718 ntBASIC12.3□□□□□ -0.44
AP3S1Q92572 AC120114.3-201ENST00000611923 658 ntBASIC12.3□□□□□ -0.44
AP3S1Q92572 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AP3S1Q92572 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 ENPP7P14-201ENST00000621765 1040 ntBASIC12.3□□□□□ -0.44
AP3S1Q92572 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 DNM1P41-201ENST00000623634 3350 ntBASIC12.29□□□□□ -0.44
AP3S1Q92572 CTAGE10P-201ENST00000318353 2408 ntBASIC12.29□□□□□ -0.44
AP3S1Q92572 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AC008764.8-201ENST00000623966 2717 ntBASIC12.29□□□□□ -0.44
AP3S1Q92572 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.29□□□□□ -0.44
AP3S1Q92572 DNAJB3-201ENST00000446806 729 ntBASIC12.29□□□□□ -0.44
AP3S1Q92572 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.29□□□□□ -0.44
AP3S1Q92572 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 TPRX2P-201ENST00000535362 881 ntBASIC12.29□□□□□ -0.44
AP3S1Q92572 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.29□□□□□ -0.44
AP3S1Q92572 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.29□□□□□ -0.44
AP3S1Q92572 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms