Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RN7SL494P-201ENST00000461517 304 ntBASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AC100858.1-201ENST00000514059 1228 ntBASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AL022344.2-201ENST00000568976 968 ntBASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AC244250.3-201ENST00000620749 366 ntBASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A21P-201ENST00000510875 1396 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A15P-201ENST00000514465 1395 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A6P-201ENST00000515148 1394 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A16P-201ENST00000526662 1395 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A9P-201ENST00000527940 1395 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A5P-201ENST00000528738 1395 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A14P-201ENST00000530386 1395 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A13P-201ENST00000534703 1395 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AL139158.3-201ENST00000641212 1562 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A12P-201ENST00000519497 2375 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FAM90A24P-201ENST00000520792 2369 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AL135901.1-201ENST00000451812 333 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 TREHP1-201ENST00000531328 465 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 TUBB8P4-201ENST00000511806 1324 ntBASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHKBP1Q8TBC3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AC117503.4-201ENST00000623229 1418 ntBASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AC008026.2-201ENST00000495438 348 ntBASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms